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GitHub / hubmapconsortium / visium-pipeline
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/hubmapconsortium%2Fvisium-pipeline
Stars: 0
Forks: 0
Open Issues: 0
License: gpl-3.0
Language: Python
Repo Size: 94.7 KB
Dependencies:
30
Created: about 1 year ago
Updated: about 1 year ago
Last pushed: about 2 months ago
Last synced: about 2 months ago
Files
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Readme
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Dependencies
docker/analysis/Dockerfile
docker
- ubuntu 20.04 build
- pypy 3.8 build
- continuumio/miniconda3 latest build
docker/trim_reads/Dockerfile
docker
- pypy 3.8 build
- anndata *
- biopython *
- h5py *
- htseq *
- leidenalg *
- manhole *
- matplotlib *
- networkx *
- numpy <1.22
- opencv-python *
- pandas *
- scanpy *
- scikit-learn *
- scipy *
- scvelo *
- tables *
- umap-learn *