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GitHub / BaranziniLab / KG_RAG
Empower Large Language Models (LLM) using Knowledge Graph based Retrieval-Augmented Generation (KG-RAG) for knowledge intensive tasks
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/BaranziniLab%2FKG_RAG
Stars: 368
Forks: 51
Open Issues: 1
License: apache-2.0
Language: Jupyter Notebook
Repo Size: 9.85 MB
Dependencies:
164
Created: 7 months ago
Updated: 26 days ago
Last pushed: 26 days ago
Last synced: 26 days ago
Commit Stats
Commits: 553
Authors: 6
Mean commits per author: 92.17
Development Distribution Score: 0.116
More commit stats: https://commits.ecosyste.ms/hosts/GitHub/repositories/BaranziniLab/KG_RAG
Topics: bert-models, bioinformatics, bioinformatics-algorithms, biomedical-applications, biomedical-informatics, context-aware, gpt, gpt35turbo, gpt4, knowledge-base, knowledge-graph, large-language-models, llama, llama2, llm, prompt-engineering, prompt-tuning, rag, retrieval-augmented-generation, sentence-transformers
Files
Dependencies
- Babel ==2.12.1
- Jinja2 ==3.1.2
- MarkupSafe ==2.1.3
- Pillow ==10.0.1
- PyPika ==0.48.9
- PyYAML ==6.0.1
- Pygments ==2.16.1
- SQLAlchemy ==2.0.21
- Send2Trash ==1.8.2
- aiohttp ==3.8.5
- aiosignal ==1.3.1
- annotated-types ==0.5.0
- anyio ==3.7.1
- appnope ==0.1.3
- argon2-cffi ==23.1.0
- argon2-cffi-bindings ==21.2.0
- arrow ==1.2.3
- asttokens ==2.4.0
- async-lru ==2.0.4
- async-timeout ==4.0.3
- attrs ==23.1.0
- backcall ==0.2.0
- backoff ==2.2.1
- bcrypt ==4.0.1
- beautifulsoup4 ==4.12.2
- bleach ==6.0.0
- certifi ==2023.7.22
- cffi ==1.15.1
- charset-normalizer ==3.2.0
- chroma-hnswlib ==0.7.3
- chromadb ==0.4.13
- click ==8.1.7
- coloredlogs ==15.0.1
- comm ==0.1.4
- dataclasses-json ==0.6.0
- debugpy ==1.8.0
- decorator ==5.1.1
- defusedxml ==0.7.1
- diskcache ==5.6.3
- exceptiongroup ==1.1.3
- executing ==1.2.0
- fastapi ==0.103.1
- fastjsonschema ==2.18.0
- filelock ==3.12.4
- flatbuffers ==23.5.26
- fqdn ==1.5.1
- frozenlist ==1.4.0
- fsspec ==2023.9.2
- greenlet ==2.0.2
- h11 ==0.14.0
- httptools ==0.6.0
- huggingface-hub ==0.17.2
- humanfriendly ==10.0
- idna ==3.4
- importlib-resources ==6.1.0
- ipykernel ==6.25.2
- ipython ==8.15.0
- isoduration ==20.11.0
- jedi ==0.19.0
- joblib ==1.3.2
- json5 ==0.9.14
- jsonpatch ==1.33
- jsonpointer ==2.4
- jsonschema ==4.19.1
- jsonschema-specifications ==2023.7.1
- jupyter-events ==0.7.0
- jupyter-lsp ==2.2.0
- jupyter_client ==8.3.1
- jupyter_core ==5.3.1
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- jupyterlab ==4.0.6
- jupyterlab-pygments ==0.2.2
- jupyterlab_server ==2.25.0
- langchain ==0.0.301
- langsmith ==0.0.40
- llama_cpp_python ==0.2.7
- marshmallow ==3.20.1
- matplotlib-inline ==0.1.6
- mistune ==3.0.1
- monotonic ==1.6
- mpmath ==1.3.0
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- nbclient ==0.8.0
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- neo4j ==5.12.0
- nest-asyncio ==1.5.8
- networkx ==3.1
- nltk ==3.8.1
- notebook ==7.0.4
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- numexpr ==2.8.6
- numpy ==1.26.0
- onnxruntime ==1.16.0
- overrides ==7.4.0
- packaging ==23.1
- pandas ==2.1.1
- pandocfilters ==1.5.0
- parso ==0.8.3
- pexpect ==4.8.0
- pickleshare ==0.7.5
- platformdirs ==3.10.0
- posthog ==3.0.2
- prometheus-client ==0.17.1
- prompt-toolkit ==3.0.39
- protobuf ==4.24.3
- psutil ==5.9.5
- ptyprocess ==0.7.0
- pulsar-client ==3.3.0
- pure-eval ==0.2.2
- pycparser ==2.21
- pydantic ==2.4.0
- pydantic_core ==2.10.0
- python-dateutil ==2.8.2
- python-dotenv ==1.0.0
- python-json-logger ==2.0.7
- pytz ==2023.3.post1
- pyzmq ==25.1.1
- referencing ==0.30.2
- regex ==2023.8.8
- requests ==2.31.0
- rfc3339-validator ==0.1.4
- rfc3986-validator ==0.1.1
- rpds-py ==0.10.3
- safetensors ==0.3.3
- scikit-learn ==1.3.1
- scipy ==1.11.2
- sentence-transformers ==2.2.2
- sentencepiece ==0.1.99
- six ==1.16.0
- sniffio ==1.3.0
- soupsieve ==2.5
- stack-data ==0.6.2
- starlette ==0.27.0
- sympy ==1.12
- tenacity ==8.2.3
- terminado ==0.17.1
- threadpoolctl ==3.2.0
- tinycss2 ==1.2.1
- tokenizers ==0.13.3
- tomli ==2.0.1
- torch ==2.0.1
- torchvision ==0.15.2
- tornado ==6.3.3
- tqdm ==4.66.1
- traitlets ==5.10.0
- transformers ==4.33.2
- typer ==0.9.0
- typing-inspect ==0.9.0
- typing_extensions ==4.8.0
- tzdata ==2023.3
- uri-template ==1.3.0
- urllib3 ==2.0.5
- uvicorn ==0.23.2
- uvloop ==0.17.0
- watchfiles ==0.20.0
- wcwidth ==0.2.6
- webcolors ==1.13
- webencodings ==0.5.1
- websocket-client ==1.6.3
- websockets ==11.0.3
- yarl ==1.9.2