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GitHub / Chaitanyachavali / pecan
The Predictive Ecosystem Analyzer (PEcAn) is an integrated ecological bioinformatics toolbox.
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/Chaitanyachavali%2Fpecan
Fork of PecanProject/pecan
Stars: 0
Forks: 0
Open Issues: 0
License: other
Language: R
Repo Size: 129 MB
Dependencies:
431
Created: almost 6 years ago
Updated: 9 months ago
Last pushed: almost 6 years ago
Last synced: 9 months ago
Files
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Readme
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Dependencies
base/all/DESCRIPTION
cran
- PEcAn.DB * depends
- PEcAn.MA * depends
- PEcAn.assim.batch * depends
- PEcAn.benchmark * depends
- PEcAn.data.atmosphere * depends
- PEcAn.data.land * depends
- PEcAn.data.remote * depends
- PEcAn.emulator * depends
- PEcAn.logger * depends
- PEcAn.priors * depends
- PEcAn.remote * depends
- PEcAn.settings * depends
- PEcAn.uncertainty * depends
- PEcAn.utils * depends
- PEcAn.workflow * depends
- PEcAn.DALEC * suggests
- PEcAn.LINKAGES * suggests
- PEcAn.allometry * suggests
- PEcAn.biocro * suggests
- PEcAn.ed * suggests
- PEcAn.photosythesis * suggests
- PEcAn.sipnet * suggests
- testthat * suggests
base/db/DESCRIPTION
cran
- DBI * imports
- PEcAn.logger * imports
- PEcAn.remote * imports
- PEcAn.utils * imports
- dbplyr >= 1.2.0 imports
- dplyr * imports
- glue * imports
- lubridate * imports
- magrittr * imports
- ncdf4 * imports
- plyr >= 1.8.4 imports
- purrr * imports
- rlang * imports
- tibble * imports
- tidyr * imports
- udunits2 * imports
- RPostgreSQL * suggests
- RSQLite * suggests
- data.table * suggests
- here * suggests
- rcrossref * suggests
- testthat >= 2.0.0 suggests
- tidyverse * suggests
- plotrix * depends
- PEcAn.logger * imports
- testthat * suggests
- PEcAn.logger * imports
- getPass * suggests
- testthat * suggests
- tools * suggests
- PEcAn.DB * depends
- methods * depends
- PEcAn.logger * imports
- PEcAn.remote * imports
- PEcAn.utils * imports
- XML >= 3.98 imports
- lubridate >= 1.6.0 imports
- plyr >= 1.8.4 imports
- testthat >= 1.0.2 suggests
- PEcAn.logger * imports
- PEcAn.remote * imports
- PeriodicTable * imports
- RCurl * imports
- XML * imports
- abind >= 1.4.5 imports
- coda >= 0.18 imports
- data.table * imports
- getPass * imports
- ggplot2 * imports
- lubridate >= 1.6.0 imports
- ncdf4 >= 1.15 imports
- plyr >= 1.8.4 imports
- randtoolbox * imports
- raster * imports
- rjags * imports
- sp * imports
- stringi * imports
- udunits2 >= 0.11 imports
- xtable * imports
- MASS * suggests
- PEcAn.DB * suggests
- PEcAn.data.atmosphere * suggests
- PEcAn.data.land * suggests
- PEcAn.emulator * suggests
- PEcAn.priors * suggests
- PEcAn.settings * suggests
- testthat >= 2.0.0 suggests
- PEcAn.DB * depends
- RCurl * depends
- RPostgreSQL * depends
- XML * depends
- data.table * depends
- dbplyr * depends
- dplyr * depends
- earth * depends
- ggmap * depends
- ggplot2 * depends
- maps * depends
- plotly * depends
- raster * depends
- scales * depends
- shiny * depends
- shinyjs * depends
- sp * depends
- PEcAn.logger * imports
- lubridate >= 1.6.0 imports
- ncdf4 >= 1.15 imports
- plyr >= 1.8.4 imports
- stringr >= 1.1.0 imports
- udunits2 >= 0.11 imports
- grid * suggests
- png * suggests
- testthat >= 1.0.2 suggests
- PEcAn.DB * imports
- PEcAn.logger * imports
- PEcAn.settings * imports
- PEcAn.utils * imports
- mockery * suggests
- testthat * suggests
- PEcAn.DB * imports
- PEcAn.data.atmosphere * imports
- PEcAn.data.land * imports
- PEcAn.logger * imports
- PEcAn.remote * imports
- PEcAn.settings * imports
- PEcAn.utils * imports
- XML * imports
- data.table * imports
- dplyr * imports
- lubridate >= 1.7.0 imports
- ncdf4 >= 1.15 imports
- udunits2 >= 0.11 imports
- BioCro * suggests
- RPostgreSQL * suggests
- mockery >= 0.3.0 suggests
- testthat >= 2.0.0 suggests
- PEcAn.logger * imports
- PEcAn.utils >= 1.4.8 imports
- testthat >= 1.0.2 suggests
- PEcAn.logger * depends
- PEcAn.utils * depends
- ncdf4 >= 1.15 imports
- udunits2 >= 0.11 imports
- testthat >= 1.0.2 suggests
- PEcAn.logger * imports
- PEcAn.remote * imports
- PEcAn.utils * imports
- lubridate >= 1.6.0 imports
- ncdf4 >= 1.15 imports
- udunits2 >= 0.11 imports
- testthat >= 1.0.2 suggests
- PEcAn.utils >= 1.4.8 imports
- ncdf4 * imports
- rjson * imports
- testthat >= 1.0.2 suggests
- PEcAn.utils * depends
- coda * depends
- PEcAn.logger * imports
- PEcAn.remote * imports
- PEcAn.settings * imports
- XML >= 3.98 imports
- abind >= 1.4.5 imports
- dplyr * imports
- hdf5r * imports
- lubridate * imports
- magrittr * imports
- ncdf4 >= 1.15 imports
- purrr * imports
- stringr >= 1.1.0 imports
- tibble * imports
- tidyr * imports
- udunits2 >= 0.11 imports
- testthat >= 1.0.2 suggests
- PEcAn.utils * depends
- PEcAn.logger * imports
- PEcAn.remote * imports
- lubridate >= 1.6.0 imports
- ncdf4 >= 1.15 imports
- testthat >= 1.0.2 suggests
- PEcAn.utils * depends
- PEcAn.logger * imports
- PEcAn.remote * imports
- lubridate >= 1.6.0 imports
- ncdf4 >= 1.15 imports
- testthat >= 1.0.2 suggests
- PEcAn.utils * depends
- PEcAn.logger * imports
- PEcAn.remote * imports
- lubridate >= 1.6.0 imports
- ncdf4 >= 1.15 imports
- testthat >= 1.0.2 suggests
- PEcAn.utils * depends
- PEcAn.logger * imports
- PEcAn.remote * imports
- lubridate >= 1.6.0 imports
- ncdf4 >= 1.15 imports
- udunits2 >= 0.11 imports
- linkages * suggests
- testthat >= 1.0.2 suggests
- PEcAn.utils * depends
- PEcAn.logger * imports
- PEcAn.remote * imports
- lubridate >= 1.6.0 imports
- ncdf4 >= 1.15 imports
- testthat >= 1.0.2 suggests
- PEcAn.logger * imports
- PEcAn.remote * imports
- PEcAn.settings * imports
- PEcAn.utils * imports
- XML * imports
- lubridate >= 1.6.0 imports
- ncdf4 >= 1.15 imports
- udunits2 >= 0.11 imports
- testthat >= 1.0.2 suggests
- PEcAn.data.atmosphere * imports
- PEcAn.logger * imports
- PEcAn.remote * imports
- PEcAn.utils * imports
- lubridate >= 1.6.0 imports
- ncdf4 >= 1.15 imports
- udunits2 >= 0.11 imports
- Maeswrap * suggests
- coda * suggests
- testthat >= 1.0.2 suggests
- PEcAn.utils * depends
- PEcAn.data.atmosphere * imports
- PEcAn.logger * imports
- PEcAn.utils * imports
- lubridate >= 1.6.0 imports
- ncdf4 >= 1.15 imports
- udunits2 >= 0.11 imports
- Rpreles * suggests
- testthat >= 1.0.2 suggests
- PEcAn.data.atmosphere * depends
- PEcAn.logger * imports
- PEcAn.remote * imports
- PEcAn.utils * imports
- lubridate >= 1.6.0 imports
- ncdf4 >= 1.15 imports
- udunits2 >= 0.11 imports
- coda * suggests
- testthat >= 1.0.2 suggests
- PEcAn.logger * imports
- PEcAn.utils >= 1.4.8 imports
- testthat >= 1.0.2 suggests
- BayesianTools * depends
- IDPmisc * depends
- PEcAn.DB * depends
- PEcAn.MA * depends
- PEcAn.logger * depends
- PEcAn.utils * depends
- dbplyr * depends
- dplyr * depends
- ellipse * depends
- mlegp * depends
- parallel * depends
- rjags * depends
- PEcAn.logger * imports
- PEcAn.remote * imports
- PEcAn.settings * imports
- coda >= 0.18 imports
- lubridate >= 1.6.0 imports
- ncdf4 >= 1.15 imports
- udunits2 >= 0.11 imports
- testthat >= 1.0.2 suggests
- PEcAn.logger * imports
- PEcAn.remote * imports
- lubridate >= 1.6.0 imports
- magic >= 1.5.0 imports
- nimble * imports
- plyr >= 1.8.4 imports
- reshape2 >= 1.4.2 imports
- testthat * suggests
- PEcAn.logger * imports
- PEcAn.remote * imports
- PEcAn.settings * imports
- SimilarityMeasures * imports
- XML >= 3.98 imports
- dbplyr * imports
- dplyr * imports
- ggplot2 * imports
- lubridate >= 1.6.0 imports
- ncdf4 >= 1.15 imports
- udunits2 >= 0.11 imports
- testthat >= 1.0.2 suggests
- methods * depends
- MASS * imports
- PEcAn.DB * imports
- PEcAn.logger * imports
- PEcAn.remote * imports
- PEcAn.utils * imports
- RAtmosphere * imports
- RCurl * imports
- REddyProc * imports
- XML >= 3.98 imports
- abind >= 1.4.5 imports
- car * imports
- data.table * imports
- dbplyr * imports
- dplyr * imports
- geonames * imports
- ggplot2 * imports
- httr * imports
- jsonlite * imports
- lubridate >= 1.6.0 imports
- magrittr * imports
- maptools * imports
- mgcv * imports
- ncdf4 >= 1.15 imports
- nneo * imports
- purrr >= 0.2.3 imports
- reshape2 * imports
- rgdal * imports
- sp * imports
- stringr >= 1.1.0 imports
- tibble * imports
- tidyr * imports
- truncnorm * imports
- udunits2 >= 0.11 imports
- zoo * imports
- doParallel * suggests
- foreach * suggests
- parallel * suggests
- progress * suggests
- rlang >= 0.2.0 suggests
- testthat >= 2.0.0 suggests
- PEcAn.logger * imports
- PEcAn.utils * imports
- testthat >= 1.0.2 suggests
- PEcAn.DB * depends
- PEcAn.utils * depends
- dbplyr * depends
- PEcAn.logger * imports
- PEcAn.remote * imports
- dbplyr * imports
- dplyr * imports
- magrittr * imports
- ncdf4 >= 1.15 imports
- traits * imports
- udunits2 >= 0.11 imports
- PEcAn.settings * suggests
- RPostgreSQL * suggests
- XML >= 3.98 suggests
- fields * suggests
- rgdal * suggests
- testthat >= 1.0.2 suggests
- dplR * depends
- PEcAn.logger * imports
- PEcAn.utils * suggests
- testthat >= 1.0.2 suggests
- PEcAn.logger * imports
- PEcAn.remote * imports
- stringr >= 1.1.0 imports
- testthat >= 1.0.2 suggests
- MASS * depends
- PEcAn.DB * depends
- PEcAn.utils * depends
- XML * depends
- lattice * depends
- PEcAn.logger * imports
- PEcAn.settings * imports
- coda >= 0.18 imports
- PEcAn.priors * suggests
- rjags * suggests
- testthat >= 1.0.2 suggests
- rjags * depends
- PEcAn.logger * imports
- coda >= 0.18 imports
- PEcAn.utils * depends
- PEcAn.logger * imports
- ggplot2 * imports
- testthat * suggests
- BayesianTools * imports
- MASS * imports
- PEcAn.assim.batch * imports
- PEcAn.logger * imports
- coda * imports
- lubridate >= 1.6.0 imports
- PEcAn.ED2 * suggests
- PEcAn.utils * suggests
- XML * suggests
- knitr * suggests
- mclust * suggests
- minpack.lm * suggests
- pwr * suggests
- testthat >= 1.0.2 suggests
- PEcAn.logger * depends
- PEcAn.priors * depends
- PEcAn.utils * depends
- ggmap * depends
- ggplot2 * depends
- gridExtra * depends
- coda >= 0.18 imports
- plyr >= 1.8.4 imports
- testthat >= 1.0.2 suggests
- DT * depends
- PEcAn.data.land * depends
- PEcAn.utils * depends
- dataone * depends
- shiny * depends
- shinyFiles * depends
- shinycssloaders * depends
- shinydashboard * depends
- stringr * depends
- SHELF * depends
- DT * depends
Dockerfile
docker
- ubuntu 16.04 build
docker/Dockerfile
docker
- amanskywalker/pecan-dev 0.1 build
docker-compose.yml
docker
- amanskywalker/pecan-dev 0.1
- mdillon/postgis 9.4
- pecan/bety latest