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GitHub / Dreycey / DebruijnExtend
This repository contains the source code for the DebruijnExtend tool. This tool uses known secondary structures for common protein kmers to predict the most likely secondary structure. This is done using a debruijn graph approach to incorporate local homology for predicting the most probable secondary structure along a protein. Tested on mac/linux
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/Dreycey%2FDebruijnExtend
Stars: 0
Forks: 0
Open Issues: 0
License: mit
Language: Jupyter Notebook
Repo Size: 66.6 MB
Dependencies:
0
Created: over 3 years ago
Updated: over 2 years ago
Last pushed: about 1 year ago
Last synced: 9 months ago
Topics: bioinformatics, protein-design, protein-structure, protein-structure-prediction
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