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GitHub / JJChenCharly / OrthoSLC
OrthoSLC: A pipeline to get Orthologous Genes using Reciprocal Best Blast Hit (RBBH) Single Linkage Clustering, indenpendent of relational database management system
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/JJChenCharly%2FOrthoSLC
Stars: 5
Forks: 1
Open Issues: 1
License: gpl-3.0
Language: Jupyter Notebook
Repo Size: 13 MB
Dependencies:
0
Created: over 1 year ago
Updated: 3 months ago
Last pushed: 3 months ago
Last synced: 3 months ago
Topics: bioinformatics, convenient-installation, core-genome, cpp-callable-binary, dereplication, genomics, independent-of-mysql, jupyter-notebook, large-dataset, large-scale, lightweight, microbe-subspecies, pan-genome, pre-compiled, reciprocal-blast-hits, single-linkage-clustering
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No dependencies found