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GitHub / Shuyib / mouse_gut_OTU
Vectorization and Unsupervised Learning of Mouse Operation Taxonomic Units to determine which species of bacteria form distinct groups in a dataset.
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/Shuyib%2Fmouse_gut_OTU
Stars: 0
Forks: 1
Open Issues: 0
License: None
Language: Jupyter Notebook
Repo Size: 91.8 KB
Dependencies:
24
Created: about 6 years ago
Updated: about 2 months ago
Last pushed: about 6 years ago
Last synced: about 2 months ago
Topics: 16s-rrna, anaconda, analysis, data-visualization, dataset, gut-microbiome, matplotlib-figures, mothur, numpy-arrays, pandas-dataframe, pca-analysis, python3, scikitlearn-machine-learning, sops, t-sne, unsupervised-learning
Files
Dependencies
- absl-py ==0.1.10
- backports.functools-lru-cache ==1.4
- dask ==0.16.1
- drivendata-submission-validator ==1.0.0
- en-core-web-sm ==2.0.0
- future ==0.16.0
- futures ==3.1.1
- hpsklearn *
- hyperas ==0.4
- hyperopt ==0.1
- ipython-genutils ==0.2.0
- jupyter-client ==5.2.2
- jupyter-console ==5.2.0
- jupyter-core ==4.4.0
- keras ==2.1.3
- markdown ==2.6.11
- nose ==1.3.7
- prompt-toolkit ==1.0.15
- protobuf ==3.5.1
- pymongo ==3.6.0
- smart-open ==1.5.6
- tensorflow ==1.5.0
- tensorflow-tensorboard ==1.5.0
- werkzeug ==0.14.1