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GitHub / TheJacksonLaboratory / LIRICAL

LIkelihood Ratio Interpretation of Clinical AbnormaLities

JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/TheJacksonLaboratory%2FLIRICAL

Stars: 22
Forks: 11
Open Issues: 7

License: other
Language: Java
Repo Size: 31.1 MB
Dependencies: 67

Created: over 6 years ago
Updated: 9 days ago
Last pushed: 4 days ago
Last synced: 2 days ago

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Dependencies

lirical-background/pom.xml maven

info.picocli:picocli
org.monarchinitiative.lirical:lirical-configuration 2.0.0-RC1

lirical-cli/pom.xml maven

lirical-configuration/pom.xml maven

org.monarchinitiative.lirical:lirical-exomiser-db-adapter 2.0.0-RC1
org.monarchinitiative.lirical:lirical-io 2.0.0-RC1

lirical-core/pom.xml maven

lirical-exomiser-db-adapter/pom.xml maven

lirical-io/pom.xml maven

pom.xml maven

ch.qos.logback:logback-classic 1.2.11
com.fasterxml.jackson.core:jackson-annotations 2.13.3
com.fasterxml.jackson.core:jackson-core 2.13.3
com.fasterxml.jackson.core:jackson-databind 2.13.3
com.fasterxml.jackson.dataformat:jackson-dataformat-yaml 2.13.3
com.fasterxml.jackson.datatype:jackson-datatype-guava 2.13.3
com.fasterxml.jackson.module:jackson-module-jsonSchema 2.13.3
com.github.samtools:htsjdk 2.24.1
com.google.guava:guava 30.1-jre
com.google.protobuf:protobuf-java 3.19.4
com.google.protobuf:protobuf-java-util 3.19.4
com.h2database:h2-mvstore 1.4.200
commons-io:commons-io 2.11.0
commons-lang:commons-lang 2.6
de.charite.compbio:jannovar-core 0.35
info.picocli:picocli 4.6.3
org.apache.commons:commons-compress 1.21
org.apache.commons:commons-csv 1.9.0
org.apiguardian:apiguardian-api
org.apiguardian:apiguardian-api 1.1.2
org.freemarker:freemarker 2.3.31
org.monarchinitiative.biodownload:biodownload 1.0.1
org.monarchinitiative.phenol:phenol-annotations 2.0.0-RC4
org.monarchinitiative.phenol:phenol-core 2.0.0-RC4
org.monarchinitiative.phenol:phenol-io 2.0.0-RC4
org.monarchinitiative.svart:svart 2.0.0-RC1
org.phenopackets:phenopacket-schema 2.0.0
org.slf4j:slf4j-api 1.7.32
ch.qos.logback:logback-classic test
org.hamcrest:hamcrest-core test
org.hamcrest:hamcrest-core 2.2 test
org.junit.jupiter:junit-jupiter test
org.junit.jupiter:junit-jupiter 5.8.2 test
org.mockito:mockito-core test
org.mockito:mockito-core 4.4.0 test

.github/workflows/maven.yml actions

actions/checkout v2 composite
actions/setup-java v2 composite

.github/workflows/pages.yml actions

JamesIves/github-pages-deploy-action v4.4.1 composite
actions/checkout v3 composite
actions/setup-java v3 composite
actions/setup-python v4 composite