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GitHub / WalhoutLab / WormClust
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/WalhoutLab%2FWormClust
Stars: 1
Forks: 0
Open Issues: 0
License: None
Language: Jupyter Notebook
Repo Size: 8.23 MB
Dependencies:
289
Created: about 4 years ago
Updated: 5 months ago
Last pushed: 5 months ago
Last synced: 5 months ago
Files
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Dependencies
- Babel ==2.6.0
- GSVA ==1.0.6
- Jinja2 ==2.10
- MarkupSafe ==1.0
- PySocks ==1.6.8
- PyVCF ==0.6.8
- PyYAML ==5.1
- Pygments ==2.2.0
- Send2Trash ==1.5.0
- Sphinx ==1.8.5
- XlsxWriter ==1.1.2
- alabaster ==0.7.12
- appdirs ==1.4.3
- asn1crypto ==0.24.0
- attrs ==19.3.0
- backcall ==0.1.0
- beautifulsoup4 ==4.7.1
- biokit ==0.4.4
- biopython ==1.73
- bioservices ==1.6.0
- bleach ==3.0.2
- brewer2mpl ==1.4.1
- certifi ==2020.6.20
- cffi ==1.11.5
- chardet ==3.0.4
- colorama ==0.4.1
- colorlog ==4.0.2
- colormap ==1.0.2
- cryptography ==2.3.1
- cycler ==0.10.0
- cyordereddict ==1.0.0
- dataclasses ==0.8
- decorator ==4.3.0
- descartes ==1.1.0
- docopt ==0.6.2
- docutils ==0.14
- dynamicTreeCut ==0.1.0
- easydev ==0.9.37
- entrypoints ==0.2.3
- factorial ==1.0.0
- findpeaks ==2.1.1
- gevent ==1.4.0
- ggplot ==0.11.5
- goatools ==0.8.9
- graphviz ==0.15
- greenlet ==0.4.15
- grequests ==0.3.0
- gseapy ==0.9.18
- idna ==2.7
- imagesize ==1.1.0
- importlib-metadata ==1.6.0
- intermine ==1.11.0
- ipykernel ==5.1.0
- ipython ==7.1.1
- ipython-genutils ==0.2.0
- ipywidgets ==7.4.2
- iterativeWGCNA ==1.1.6
- jedi ==0.13.1
- joblib ==0.14.1
- jsonschema ==2.6.0
- jupyter ==1.0.0
- jupyter-client ==5.2.3
- jupyter-console ==6.0.0
- jupyter-core ==4.4.0
- kiwisolver ==1.0.1
- lxml ==4.3.2
- matplotlib ==3.2.1
- matplotlib-venn ==0.11.6
- mistune ==0.8.4
- mizani ==0.6.0
- mkl-fft ==1.0.4
- mkl-random ==1.0.1
- more-itertools ==8.3.0
- mygene ==3.0.0
- nbconvert ==5.3.1
- nbformat ==4.4.0
- networkx ==2.4
- nose ==1.3.7
- notebook ==5.7.0
- numpy ==1.18.3
- numpydoc ==0.8.0
- opencv-python ==4.4.0.42
- packaging ==19.0
- palettable ==3.3.0
- pandas ==1.1.0
- pandocfilters ==1.4.2
- parso ==0.3.1
- patsy ==0.5.1
- peakdetect ==1.1
- pexpect ==4.6.0
- pickleshare ==0.7.5
- pipenv ==2018.11.26
- plotly ==4.4.1
- plotnine ==0.6.0
- pluggy ==0.13.1
- prometheus-client ==0.4.2
- prompt-toolkit ==2.0.7
- psutil ==5.6.2
- ptyprocess ==0.6.0
- py ==1.8.1
- pyOpenSSL ==18.0.0
- pycparser ==2.19
- pydot ==1.2.4
- pygraphviz ==1.5
- pyparsing ==2.3.0
- pysam ==0.15.2
- pytest ==5.4.3
- python-dateutil ==2.7.5
- python-igraph ==0.7.1.post6
- pytz ==2018.7
- pyzmq ==17.1.2
- qtconsole ==4.4.2
- requests ==2.20.0
- requests-cache ==0.4.13
- retrying ==1.3.3
- rpy2 ==2.9.5
- scikit-learn ==0.20.3
- scipy ==1.4.1
- seaborn ==0.9.0
- six ==1.11.0
- sklearn ==0.0
- snowballstemmer ==1.2.1
- soupsieve ==1.8
- sphinxcontrib-websupport ==1.1.0
- statannot ==0.2.3
- statsmodels ==0.9.0
- suds-jurko ==0.6
- terminado ==0.8.1
- testpath ==0.4.2
- threadpoolctl ==2.1.0
- torch ==1.10.2
- tornado ==5.1.1
- tqdm ==4.43.0
- traitlets ==4.3.2
- typing-extensions ==4.1.1
- urllib3 ==1.23
- vcfpy ==0.13.6
- virtualenv-clone ==0.5.4
- wcwidth ==0.1.7
- webencodings ==0.5.1
- wget ==3.2
- widgetsnbextension ==3.4.2
- wrapt ==1.11.1
- xlrd ==1.1.0
- xmltodict ==0.12.0
- zipp ==3.1.0
requirements.txt
pypi
- Babel ==2.6.0
- GSVA ==1.0.6
- Jinja2 ==2.10
- MarkupSafe ==1.0
- PySocks ==1.6.8
- PyYAML ==5.1
- Pygments ==2.2.0
- Send2Trash ==1.5.0
- Sphinx ==1.8.5
- XlsxWriter ==1.1.2
- alabaster ==0.7.12
- appdirs ==1.4.3
- asn1crypto ==0.24.0
- attrs ==19.3.0
- backcall ==0.1.0
- beautifulsoup4 ==4.7.1
- biokit ==0.4.4
- biopython ==1.73
- bioservices ==1.6.0
- bleach ==3.0.2
- brewer2mpl ==1.4.1
- certifi ==2020.6.20
- cffi ==1.11.5
- chardet ==3.0.4
- colorama ==0.4.1
- colorlog ==4.0.2
- colormap ==1.0.2
- cryptography ==2.3.1
- cycler ==0.10.0
- dataclasses ==0.8
- decorator ==4.3.0
- descartes ==1.1.0
- docopt ==0.6.2
- docutils ==0.14
- dynamicTreeCut ==0.1.0
- easydev ==0.9.37
- entrypoints ==0.2.3
- factorial ==1.0.0
- findpeaks ==2.1.1
- gevent ==1.4.0
- ggplot ==0.11.5
- goatools ==0.8.9
- graphviz ==0.15
- greenlet ==0.4.15
- grequests ==0.3.0
- gseapy ==0.9.18
- idna ==2.7
- imagesize ==1.1.0
- importlib-metadata ==1.6.0
- intermine ==1.11.0
- ipykernel ==5.1.0
- ipython ==7.1.1
- ipython-genutils ==0.2.0
- ipywidgets ==7.4.2
- iterativeWGCNA ==1.1.6
- jedi ==0.13.1
- joblib ==0.14.1
- jsonschema ==2.6.0
- jupyter ==1.0.0
- jupyter-client ==5.2.3
- jupyter-console ==6.0.0
- jupyter-core ==4.4.0
- kiwisolver ==1.0.1
- lxml ==4.3.2
- matplotlib ==3.2.1
- matplotlib-venn ==0.11.6
- mistune ==0.8.4
- mizani ==0.6.0
- mkl-fft ==1.0.4
- mkl-random ==1.0.1
- more-itertools ==8.3.0
- mygene ==3.0.0
- nbconvert ==5.3.1
- nbformat ==4.4.0
- networkx ==2.4
- nose ==1.3.7
- notebook ==5.7.0
- numpy ==1.18.3
- numpydoc ==0.8.0
- opencv-python ==4.4.0.42
- packaging ==19.0
- palettable ==3.3.0
- pandas ==1.1.0
- pandocfilters ==1.4.2
- parso ==0.3.1
- patsy ==0.5.1
- peakdetect ==1.1
- pexpect ==4.6.0
- pickleshare ==0.7.5
- pipenv ==2018.11.26
- plotly ==4.4.1
- plotnine ==0.6.0
- pluggy ==0.13.1
- prometheus-client ==0.4.2
- prompt-toolkit ==2.0.7
- psutil ==5.6.2
- ptyprocess ==0.6.0
- py ==1.8.1
- pyOpenSSL ==18.0.0
- pycparser ==2.19
- pydot ==1.2.4
- pygraphviz ==1.5
- pyparsing ==2.3.0
- pysam ==0.15.2
- pytest ==5.4.3
- python-dateutil ==2.7.5
- python-igraph ==0.7.1.post6
- pytz ==2018.7
- pyzmq ==17.1.2
- qtconsole ==4.4.2
- requests ==2.20.0
- requests-cache ==0.4.13
- retrying ==1.3.3
- rpy2 ==2.9.5
- scikit-learn ==0.20.3
- scipy ==1.4.1
- seaborn ==0.9.0
- six ==1.11.0
- sklearn ==0.0
- snowballstemmer ==1.2.1
- soupsieve ==1.8
- sphinxcontrib-websupport ==1.1.0
- statannot ==0.2.3
- statsmodels ==0.9.0
- suds-jurko ==0.6
- terminado ==0.8.1
- testpath ==0.4.2
- threadpoolctl ==2.1.0
- torch ==1.10.2
- tornado ==5.1.1
- tqdm ==4.43.0
- traitlets ==4.3.2
- typing-extensions ==4.1.1
- urllib3 ==1.23
- virtualenv-clone ==0.5.4
- wcwidth ==0.1.7
- webencodings ==0.5.1
- wget ==3.2
- widgetsnbextension ==3.4.2
- wrapt ==1.11.1
- xlrd ==1.1.0
- xmltodict ==0.12.0
- zipp ==3.1.0