Ecosyste.ms: Repos

An open API service providing repository metadata for many open source software ecosystems.

Package Usage: pypi: biokit

Set of tools related to Bioinformatics (e.g., visualisation)
24 versions
Latest release: over 2 years ago
697 downloads last month

View more package details: https://packages.ecosyste.ms/registries/pypi.org/packages/biokit

View more repository details: https://repos.ecosyste.ms/hosts/GitHub/repositories/biokit%2Fbiokit

Dependent Repos 12

dreamtools/dreamtools
Code sharing related to DREAM challenges
  • * requirements.txt
  • * setup.py

Size: 7.1 MB - Last synced: 19 days ago - Pushed: about 7 years ago

CancerRxGene/gdsctools
Tools related to the Genomics of Drug Sensitivity in Cancer (GDSC) projects (http://www.cancerrxgene.org/ )
  • ==0.4.1 requirements.txt

Size: 14.3 MB - Last synced: 3 days ago - Pushed: over 2 years ago

Disonay/NNmnist
  • 0.5.0 poetry.lock
  • ^0.5.0 pyproject.toml

Size: 157 KB - Last synced: about 1 year ago - Pushed: about 2 years ago

cellnopt/cellnopt
Training of logic models of signalling networks using prior knowledge networks and perturbation data.
  • * setup.py

Size: 11.3 MB - Last synced: 25 days ago - Pushed: about 4 years ago

petercombs/dicty
  • ==0.4.2 requirements.txt

Size: 1.78 MB - Last synced: about 1 year ago - Pushed: over 1 year ago

Cloud-PG/smart-cache
A project to develop and test solutions for smart caching
  • ==0.4.6 Probe/requirements.txt

Size: 32.6 MB - Last synced: 12 months ago - Pushed: 12 months ago

nxwi/illacceptanything Fork of illacceptanything/illacceptanything
The project where literally anything* goes.
  • * data/requirements.txt

Size: 1.33 GB - Last synced: 7 months ago - Pushed: over 1 year ago

nandigamchandu/netlify
  • ==0.4.2 requirements.txt

Last synced: over 1 year ago

saomyachaudhury/WESAD_Sensor_Data_Analysis
  • ==0.5.0 requirements.txt

Size: 31.3 MB - Last synced: about 1 year ago - Pushed: over 1 year ago

illacceptanything/illacceptanything
The project where literally anything* goes.
  • * data/requirements.txt

Size: 1.47 GB - Last synced: 10 days ago - Pushed: 10 days ago

THZ34/biokit
  • >=0.0.1.dev6 requirements.txt

Size: 30.8 MB - Last synced: 14 days ago - Pushed: 14 days ago

wanesta/rfecvNano
The development of advection–dispersion particle transport models (PTM) for transport of nanoparticles in porous media has focused on improving model fit by inclusion of empirical parameters. However, this has done little to disentangle the complex behavior of nanoparticles in porous media and to provide mechanistic insights into nanoparticle transport. The most prominent limitation of current PTMs is that they do not consider the influence of physicochemical conditions of the experiments on the transport of nanomaterials. Here, we overcome this limitation by bypassing traditional advection–dispersion PTMs and relating the physicochemical conditions of the experiments to the experimental outcome using ensemble machine-learning methods. We identify a small set of factors that seem to determine the transport of nanoparticles in column experiments by recursive feature elimination with cross validation. .
  • ==0.0.5 requirements.txt

Size: 363 KB - Last synced: about 2 months ago - Pushed: over 8 years ago

ntchambers/illacceptanything
The project where literally anything* goes
  • * requirements.txt

Last synced: over 1 year ago

doaa-altarawy/dreamtools Fork of dreamtools/dreamtools
Code sharing related to DREAM challenges
  • * setup.py

Size: 7.06 MB - Last synced: 9 months ago - Pushed: over 8 years ago

yyx5048/Cubic-Perovskite-WorkFunction
  • ==0.4.4 requirements.txt

Size: 4.19 MB - Last synced: 5 months ago - Pushed: over 3 years ago

eli-s-goldberg/rfecvNano
The development of advection–dispersion particle transport models (PTM) for transport of nanoparticles in porous media has focused on improving model fit by inclusion of empirical parameters. However, this has done little to disentangle the complex behavior of nanoparticles in porous media and to provide mechanistic insights into nanoparticle transport. The most prominent limitation of current PTMs is that they do not consider the influence of physicochemical conditions of the experiments on the transport of nanomaterials. Here, we overcome this limitation by bypassing traditional advection–dispersion PTMs and relating the physicochemical conditions of the experiments to the experimental outcome using ensemble machine-learning methods. We identify a small set of factors that seem to determine the transport of nanoparticles in column experiments by recursive feature elimination with cross validation. .
  • ==0.0.5 requirements.txt

Size: 363 KB - Last synced: 7 months ago - Pushed: over 8 years ago

007gzs/test
  • * requirements.txt

Size: 1.6 MB - Last synced: 4 months ago - Pushed: 4 months ago

taylorsegell/GitRepoProject-TJS
Intergration with CP4D and Git in JupyterLab
  • ==0.5.0 Diabetes-Modeling/requirements.txt

Size: 2.67 MB - Last synced: about 1 year ago - Pushed: over 1 year ago

kipkurui/XGB-TFBSContext
An Ensemble Approach to Elucidating Transcription Factor Binding Specificity and Occupancy
  • ==0.2.1 requirements.txt

Size: 35.8 MB - Last synced: 1 day ago - Pushed: over 5 years ago

TheBearodactyl/illacceptanything Fork of illacceptanything/illacceptanything
The project where literally anything* goes.
  • * data/requirements.txt

Size: 1.33 GB - Last synced: 10 months ago - Pushed: 10 months ago

braillescreen/illacceptanything Fork of illacceptanything/illacceptanything
The project where literally anything* goes.
  • * data/requirements.txt

Size: 1.47 GB - Last synced: 9 months ago - Pushed: about 1 year ago

boginw/illacceptanything Fork of illacceptanything/illacceptanything
The project where literally anything* goes.
  • * data/requirements.txt

Size: 1.33 GB - Last synced: about 1 month ago - Pushed: 9 months ago

harel-coffee/nanogbcdt-auto Fork of eli-s-goldberg/nanogbcdt
Distinguishing engineered nanomaterials from natural nanomaterials using gradient-boosted classification decision trees
  • ==0.3.2 setup.py

Size: 2.44 MB - Last synced: about 1 month ago - Pushed: 8 months ago

eac54/gdsctools Fork of CancerRxGene/gdsctools
Tools related to the Genomics of Drug Sensitivity in Cancer (GDSC) projects (http://www.cancerrxgene.org/ )
  • ==0.4.1 requirements.txt

Size: 14.2 MB - Last synced: 8 months ago - Pushed: over 6 years ago

Dio-plutus/Data-science-tools-petroleum-exploration-and-production Fork of mycarta/Data-science-tools-petroleum-exploration-and-production
Python and R notebooks accompanying a talk at the 2018 CSEG / CSPG Geoconvention in Calgary - and a lot MORE!
  • * environment.yml

Size: 35.1 MB - Last synced: 8 months ago - Pushed: about 4 years ago

WalhoutLab/WormClust
  • ==0.4.4 2_b_UnsupervisedApproach/requirements.txt
  • ==0.4.4 requirements.txt

Size: 8.23 MB - Last synced: 4 months ago - Pushed: 4 months ago

sednabcn/simleng_ai
A Python library to develop strategies on Predictive modelling
  • * setup.py
  • >=0.5.0 simleng_ai.egg-info/requires.txt

Size: 67.6 MB - Last synced: 2 months ago - Pushed: 2 months ago