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GitHub / YaoXinZhi / PheSeq
PheSeq, A Bayesian Deep Learning Model to Enhance and Interpret the Gene Disease Association Studies
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/YaoXinZhi%2FPheSeq
Stars: 1
Forks: 2
Open Issues: 0
License: apache-2.0
Language: Python
Repo Size: 102 MB
Dependencies:
95
Created: over 2 years ago
Updated: 4 months ago
Last pushed: 4 months ago
Last synced: 4 months ago
Topics: bayesian-deep-learning, bayesian-inference, bioinfomatics, biomedical-nlp
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Dependencies
requirements.txt
pypi
- GitPython ==3.1.24
- Jinja2 ==3.0.3
- MarkupSafe ==2.0.1
- Pillow ==8.1.0
- PyMySQL ==1.0.2
- Pygments ==2.7.4
- QtPy ==1.11.2
- Send2Trash ==1.8.0
- appdirs ==1.4.4
- appnope ==0.1.2
- argon2-cffi ==21.1.0
- attrs ==21.2.0
- backcall ==0.2.0
- beautifulsoup4 ==4.9.3
- biopython ==1.79
- bleach ==4.1.0
- blis ==0.7.4
- bs4 ==0.0.1
- catalogue ==1.0.0
- certifi ==2020.12.5
- cffi ==1.15.0
- cgecore ==1.5.6
- chardet ==4.0.0
- cymem ==2.0.5
- debugpy ==1.5.1
- decorator ==4.4.2
- defusedxml ==0.7.1
- distlib ==0.3.1
- docopt ==0.6.2
- entrypoints ==0.3
- filelock ==3.0.12
- gitdb ==4.0.7
- idna ==2.10
- ipykernel ==6.5.1
- ipython ==7.29.0
- ipython-genutils ==0.2.0
- ipywidgets ==7.6.5
- jedi ==0.18.0
- jsonschema ==4.2.1
- jupyter ==1.0.0
- jupyter-client ==7.1.0
- jupyter-console ==6.4.0
- jupyter-core ==4.9.1
- jupyterlab-pygments ==0.1.2
- jupyterlab-widgets ==1.0.2
- matplotlib-inline ==0.1.3
- mistune ==0.8.4
- murmurhash ==1.0.5
- nbclient ==0.5.9
- nbconvert ==6.3.0
- nbformat ==5.1.3
- nest-asyncio ==1.5.1
- notebook ==6.4.6
- numpy ==1.19.5
- packaging ==21.3
- pandocfilters ==1.5.0
- parso ==0.8.1
- pexpect ==4.8.0
- pickleshare ==0.7.5
- pipreqs ==0.4.10
- plac ==1.1.3
- preshed ==3.0.5
- prometheus-client ==0.12.0
- prompt-toolkit ==3.0.14
- ptyprocess ==0.7.0
- pycparser ==2.21
- pyparsing ==3.0.6
- pyrsistent ==0.18.0
- python-dateutil ==2.8.2
- pyzmq ==22.3.0
- qtconsole ==5.2.1
- requests ==2.25.1
- six ==1.15.0
- smmap ==4.0.0
- soupsieve ==2.2.1
- spacy ==2.3.5
- srsly ==1.0.5
- tabulate ==0.8.9
- terminado ==0.12.1
- testpath ==0.5.0
- thinc ==7.4.5
- torch ==1.7.1
- torchaudio ==0.7.2
- torchvision ==0.8.2
- tornado ==6.1
- tqdm ==4.56.0
- traitlets ==5.1.1
- typing-extensions ==3.7.4.3
- urllib3 ==1.26.2
- virtualenv ==20.3.1
- wasabi ==0.8.0
- wcwidth ==0.2.5
- webencodings ==0.5.1
- widgetsnbextension ==3.5.2
- yarg ==0.1.9