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GitHub / adamjorr / kbbq-py
k-mer based base quality recalibration
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/adamjorr%2Fkbbq-py
Stars: 2
Forks: 1
Open Issues: 9
License: mit
Language: Python
Repo Size: 769 KB
Dependencies:
74
Created: almost 6 years ago
Updated: over 3 years ago
Last pushed: almost 3 years ago
Last synced: over 1 year ago
Files
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Readme
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Dependencies
Pipfile
pypi
- coverage * develop
- pytest * develop
- pytest-cov * develop
- sphinx * develop
- sphinx_rtd_theme * develop
- khmer *
- matplotlib *
- numpy *
- pandas *
- pysam *
- scikit-learn *
- scipy *
- seaborn *
requirements.txt
pypi
Pipfile.lock
pypi
- alabaster ==0.7.12 develop
- atomicwrites ==1.3.0 develop
- attrs ==19.1.0 develop
- babel ==2.7.0 develop
- certifi ==2019.6.16 develop
- chardet ==3.0.4 develop
- coverage ==4.5.4 develop
- docutils ==0.15.2 develop
- idna ==2.8 develop
- imagesize ==1.1.0 develop
- importlib-metadata ==0.19 develop
- jinja2 ==2.10.1 develop
- markupsafe ==1.1.1 develop
- more-itertools ==7.2.0 develop
- packaging ==19.1 develop
- pluggy ==0.12.0 develop
- py ==1.8.0 develop
- pygments ==2.4.2 develop
- pyparsing ==2.4.2 develop
- pytest ==5.0.1 develop
- pytest-cov ==2.7.1 develop
- pytz ==2019.1 develop
- requests ==2.22.0 develop
- six ==1.12.0 develop
- snowballstemmer ==1.9.0 develop
- sphinx ==2.1.2 develop
- sphinx-rtd-theme ==0.4.3 develop
- sphinxcontrib-applehelp ==1.0.1 develop
- sphinxcontrib-devhelp ==1.0.1 develop
- sphinxcontrib-htmlhelp ==1.0.2 develop
- sphinxcontrib-jsmath ==1.0.1 develop
- sphinxcontrib-qthelp ==1.0.2 develop
- sphinxcontrib-serializinghtml ==1.1.3 develop
- urllib3 ==1.25.3 develop
- wcwidth ==0.1.7 develop
- zipp ==0.5.2 develop
- bz2file ==0.98
- cycler ==0.10.0
- joblib ==0.13.2
- khmer ==2.1.1
- kiwisolver ==1.1.0
- matplotlib ==3.1.1
- numpy ==1.17.0
- pandas ==0.25.0
- pyparsing ==2.4.2
- pysam ==0.15.3
- python-dateutil ==2.8.0
- pytz ==2019.1
- scikit-learn ==0.21.3
- scipy ==1.3.0
- screed ==1.0
- seaborn ==0.9.0
- six ==1.12.0