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GitHub / aryazand / CMV_Promoters_by_host_cell_type
Analyze differential activity of promoters in the cytomegalovirus (CMV) genome during infection of different cell types
Stars: 0
Forks: 0
Open Issues: 0
License: None
Language: R
Repo Size: 55.7 KB
Dependencies:
102
Created: over 1 year ago
Updated: 12 months ago
Last pushed: about 1 year ago
Last synced: 12 months ago
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Dependencies
env/environment.yml
conda
- _libgcc_mutex 0.1
- _openmp_mutex 4.5
- alsa-lib 1.2.7.2
- bowtie 1.3.1
- bzip2 1.0.8
- ca-certificates 2022.9.24
- cairo 1.16.0
- cni 1.0.1
- cni-plugins 1.0.1
- cutadapt 4.1
- dnaio 0.9.1
- expat 2.4.9
- fastq-pair 1.0
- fastqc 0.11.9
- font-ttf-dejavu-sans-mono 2.37
- font-ttf-inconsolata 3.000
- font-ttf-source-code-pro 2.038
- font-ttf-ubuntu 0.83
- fontconfig 2.14.0
- fonts-conda-ecosystem 1
- fonts-conda-forge 1
- freetype 2.12.1
- gettext 0.21.1
- giflib 5.2.1
- graphite2 1.3.13
- harfbuzz 5.3.0
- icu 70.1
- isa-l 2.30.0
- jpeg 9e
- jq 1.6
- keyutils 1.6.1
- krb5 1.19.3
- lcms2 2.12
- ld_impl_linux-64 2.39
- lerc 4.0.0
- libarchive 3.5.2
- libcups 2.3.3
- libdeflate 1.14
- libedit 3.1.20191231
- libffi 3.4.2
- libgcc-ng 12.2.0
- libglib 2.74.0
- libgomp 12.2.0
- libiconv 1.17
- libnsl 2.0.0
- libpng 1.6.38
- libseccomp 2.4.4
- libsqlite 3.39.4
- libstdcxx-ng 12.2.0
- libtiff 4.4.0
- libuuid 2.32.1
- libwebp-base 1.2.4
- libxcb 1.13
- libxml2 2.10.3
- libzlib 1.2.13
- lz4-c 1.9.3
- lzo 2.10
- ncurses 6.3
- oniguruma 6.9.8
- openjdk 17.0.3
- openssl 3.0.5
- pbzip2 1.1.13
- pcre2 10.37
- perl 5.32.1
- pigz 2.6
- pip 22.3
- pixman 0.40.0
- pthread-stubs 0.4
- python 3.10.6
- python-isal 1.1.0
- python_abi 3.10
- readline 8.1.2
- seqkit 2.3.1
- setuptools 65.5.0
- singularity 3.8.6
- squashfs-tools 4.4
- tbb 2021.6.0
- tk 8.6.12
- trim-galore 0.6.7
- tzdata 2022e
- wheel 0.37.1
- xopen 1.6.0
- xorg-fixesproto 5.0
- xorg-inputproto 2.3.2
- xorg-kbproto 1.0.7
- xorg-libice 1.0.10
- xorg-libsm 1.2.3
- xorg-libx11 1.7.2
- xorg-libxau 1.0.9
- xorg-libxdmcp 1.1.3
- xorg-libxext 1.3.4
- xorg-libxfixes 5.0.3
- xorg-libxi 1.7.10
- xorg-libxrender 0.9.10
- xorg-libxtst 1.2.3
- xorg-recordproto 1.14.2
- xorg-renderproto 0.11.1
- xorg-xextproto 7.3.0
- xorg-xproto 7.0.31
- xz 5.2.6
- zlib 1.2.13
- zstd 1.5.2