assuntad23/galaxy | GitHub | Ecosyste.ms: Repos

Loading...

Readme

Loading...

config/plugins/visualizations/h5web/package.json npm

parcel ^2.9.3 development
@h5web/app ^8.0.0
buffer ^6.0.3
normalize.css ^8.0.1
react 18.2.0
react-dom 18.2.0

.github/workflows/api.yaml actions

actions/cache v3 composite
actions/checkout v3 composite
actions/setup-python v4 composite
actions/upload-artifact v3 composite
codecov/codecov-action v3 composite
postgres 13 docker

.github/workflows/build_container_image.yaml actions

actions-hub/docker master composite
actions-hub/docker/login master composite
actions/checkout v3 composite

.github/workflows/check_test_class_names.yaml actions

actions/cache v3 composite
actions/checkout v3 composite
actions/setup-python v4 composite

.github/workflows/codeql-analysis.yml actions

actions/checkout v3 composite
github/codeql-action/analyze v2 composite
github/codeql-action/autobuild v2 composite
github/codeql-action/init v2 composite

.github/workflows/converter_tests.yaml actions

actions/cache v3 composite
actions/checkout v3 composite
actions/setup-python v4 composite
actions/upload-artifact v3 composite

.github/workflows/cwl_conformance.yaml actions

actions/cache v3 composite
actions/checkout v3 composite
actions/setup-python v4 composite
actions/upload-artifact v3 composite
codecov/codecov-action v3 composite
postgres 13 docker

.github/workflows/db_indexes.yaml actions

actions/cache v3 composite
actions/checkout v3 composite
actions/setup-python v4 composite
postgres ${{ matrix.postgresql-version }} docker

.github/workflows/dependencies.yaml actions

actions/cache v3 composite
actions/checkout v3 composite
actions/setup-python v4 composite
peter-evans/create-pull-request v4 composite

.github/workflows/deployment.yaml actions

actions/cache v3 composite
actions/checkout v3 composite
actions/setup-python v4 composite
actions/upload-artifact v2 composite
nanasess/setup-chromedriver v1 composite

.github/workflows/docs.yaml actions

actions/cache v3 composite
actions/checkout v3 composite
actions/setup-python v4 composite

.github/workflows/first_startup.yaml actions

actions/cache v3 composite
actions/checkout v3 composite
actions/setup-node v3 composite
actions/setup-python v4 composite

.github/workflows/framework.yaml actions

actions/cache v3 composite
actions/checkout v3 composite
actions/setup-python v4 composite
actions/upload-artifact v3 composite
codecov/codecov-action v3 composite
postgres 13 docker

.github/workflows/integration.yaml actions

CodingNagger/minikube-setup-action v1.0.6 composite
actions/cache v3 composite
actions/checkout v3 composite
actions/setup-python v4 composite
actions/upload-artifact v3 composite
codecov/codecov-action v3 composite
postgres 13 docker
rabbitmq * docker

.github/workflows/integration_selenium.yaml actions

actions/cache v3 composite
actions/checkout v3 composite
actions/setup-node v3 composite
actions/setup-python v4 composite
actions/upload-artifact v3 composite
codecov/codecov-action v3 composite
nanasess/setup-chromedriver v1 composite
postgres 13 docker

.github/workflows/jest.yaml actions

actions/checkout v3 composite
actions/setup-node v3 composite

.github/workflows/js_lint.yaml actions

actions/checkout v3 composite
actions/setup-node v3 composite

.github/workflows/labels-verifier.yaml actions

actions/github-script v6 composite

.github/workflows/lint.yaml actions

actions/cache v3 composite
actions/checkout v3 composite
actions/setup-python v4 composite
isort/isort-action master composite
psf/black stable composite

.github/workflows/lint_openapi_schema.yml actions

actions/cache v3 composite
actions/checkout v3 composite
actions/setup-python v4 composite

.github/workflows/maintenance_bot.yaml actions

actions/github-script v6 composite
actions/labeler v4 composite

.github/workflows/mulled.yaml actions

actions/cache v3 composite
actions/checkout v3 composite
actions/setup-python v4 composite
actions/upload-artifact v3 composite
eWaterCycle/setup-apptainer v2 composite

.github/workflows/osx_startup.yaml actions

actions/cache v3 composite
actions/checkout v3 composite
conda-incubator/setup-miniconda v2 composite

.github/workflows/performance.yaml actions

actions/cache v3 composite
actions/checkout v3 composite
actions/setup-python v4 composite
actions/upload-artifact v3 composite
postgres 13 docker

.github/workflows/reports_startup.yaml actions

actions/cache v3 composite
actions/checkout v3 composite
actions/setup-node v3 composite
actions/setup-python v4 composite

.github/workflows/selenium.yaml actions

actions/cache v3 composite
actions/checkout v3 composite
actions/setup-node v3 composite
actions/setup-python v4 composite
actions/upload-artifact v3 composite
codecov/codecov-action v3 composite
nanasess/setup-chromedriver v1 composite
postgres 13 docker

.github/workflows/test_galaxy_packages.yaml actions

actions/cache v3 composite
actions/checkout v3 composite
actions/setup-python v4 composite

.github/workflows/test_galaxy_release.yaml actions

actions/checkout v3 composite

.github/workflows/toolshed.yaml actions

actions/cache v3 composite
actions/checkout v3 composite
actions/setup-python v4 composite
actions/upload-artifact v3 composite
postgres 13 docker

.github/workflows/unit-postgres.yaml actions

actions/cache v3 composite
actions/checkout v3 composite
actions/setup-python v4 composite
postgres 13 docker

.github/workflows/unit.yaml actions

actions/cache v3 composite
actions/checkout v3 composite
actions/setup-python v4 composite
actions/upload-artifact v3 composite
codecov/codecov-action v3 composite

client/package.json npm

@babel/core ^7.20.5 development
@babel/helper-validator-identifier ^7.19.1 development
@babel/plugin-syntax-dynamic-import ^7.8.3 development
@babel/plugin-transform-runtime ^7.19.6 development
@babel/preset-env ^7.20.2 development
@babel/preset-typescript ^7.18.6 development
@cerner/duplicate-package-checker-webpack-plugin ^2.3.0 development
@testing-library/jest-dom ^5.16.4 development
@typescript-eslint/eslint-plugin ^5.45.1 development
@typescript-eslint/parser ^5.45.1 development
@vue/test-utils ^1.3.3 development
@vue/tsconfig ^0.1.3 development
@vue/vue2-jest ^29.2.1 development
amdi18n-loader ^0.9.3 development
autoprefixer 10.4.5 development
axios-mock-adapter ^1.20.0 development
babel-jest ^29.3.1 development
buffer ^6.0.3 development
cpy-cli ^4.2.0 development
css-loader ^6.7.1 development
css-minimizer-webpack-plugin ^4.0.0 development
del ^6.0.0 development
eslint ^8.27.0 development
eslint-plugin-compat ^4.0.2 development
eslint-plugin-vue ^9.7.0 development
eslint-plugin-vuejs-accessibility ^2.0.0 development
expose-loader ^4.0.0 development
gulp ^4.0.2 development
ignore-loader ^0.1.2 development
imports-loader ^4.0.0 development
jest ^29.3.1 development
jest-environment-jsdom ^29.3.1 development
jest-location-mock ^1.0.9 development
json-loader ^0.5.7 development
karma ^6.3.16 development
karma-chrome-launcher ^3.1.0 development
karma-polyfill ^1.1.0 development
karma-qunit ^4.1.2 development
karma-webpack ^5.0.0 development
mini-css-extract-plugin ^2.5.3 development
postcss-loader ^7.0.1 development
prettier ^2.8.3 development
process ^0.11.10 development
qunit ^2.17.2 development
raw-loader ^4.0.2 development
sass ^1.53.0 development
sass-loader ^13.0.2 development
sinon ^13.0.1 development
store ^2.0.12 development
style-loader ^3.3.1 development
ts-jest ^29.0.3 development
ts-loader ^9.4.1 development
tsconfig-paths-webpack-plugin ^4.0.0 development
typescript ^4.9.3 development
typescript-eslint ^0.0.1-alpha.0 development
vue-loader ^15.10.0 development
vue-template-compiler ^2.7.8 development
webpack ^5.73.0 development
webpack-cli ^4.10.0 development
webpack-dev-server ^4.9.3 development
webpack-merge ^5.8.0 development
yaml-jest ^1.2.0 development
yaml-loader ^0.8.0 development
@fontsource/atkinson-hyperlegible ^4.5.10
@fortawesome/fontawesome-free ^5.15.4
@fortawesome/fontawesome-svg-core ^6.2.1
@fortawesome/free-brands-svg-icons ^5.15.4
@fortawesome/free-regular-svg-icons ^5.15.4
@fortawesome/free-solid-svg-icons ^5.15.4
@fortawesome/vue-fontawesome ^2.0.9
@handsontable/vue ^2.0.0
@hirez_io/observer-spy ^2.1.2
@johmun/vue-tags-input ^2.1.0
@pinia/testing ^0.0.14
@popperjs/core ^2.11.5
@sentry/browser ^6.17.4
@types/d3 ^7.4.0
@vueuse/core ^9.10.0
assert ^2.0.0
axios ^0.25.0
babel-runtime ^6.26.0
backbone 1.4.1
bootstrap 4.6
bootstrap-vue ^2.23.0
citation-js ^0.6.4
core-js ^3.21.0
csv-parse ^5.3.0
d3 ^7.8.0
d3-zoom ^3.0.0
d3v3 npm:d3@3
date-fns ^2.28.0
date-fns-tz ^1.3.3
decode-uri-component ^0.2.1
dom-to-image ^2.6.0
dumpmeta-webpack-plugin ^0.2.0
elkjs ^0.7.1
file-saver ^2.0.5
flush-promises ^1.0.2
glob ^7.2.0
handsontable ^4.0.0
hsluv ^0.1.0
imask ^6.4.0
jquery 2
jquery-migrate ~1.4
jquery-mousewheel ^3.1.13
jquery-ui ^1.13.2
jspdf ^2.5.1
linkify-html ^3.0.5
linkifyjs ^3.0.5
localforage ^1.10.0
lodash.isequal ^4.5.0
markdown-it ^12.3.2
markdown-it-regexp ^0.4.0
object-hash ^3.0.0
openapi-typescript ^6.1.0
openapi-typescript-fetch ^1.1.3
pinia ^2.0.23
pinia-plugin-persistedstate ^2.4.0
popper.js ^1.16.1
pretty-bytes ^6.0.0
pyre-to-regexp ^0.0.5
querystring-es3 ^0.2.1
regenerator-runtime ^0.13.9
requirejs 2.3.6
rxjs ^7.5.2
rxjs-spy ^8.0.2
rxjs-spy-devtools-plugin ^0.0.4
slugify ^1.6.5
snake-case ^3.0.4
splitpanes 2.3.8
stream-browserify ^3.0.0
timers-browserify ^2.0.12
toastr ^2.1.4
tus-js-client ^2.3.0
underscore ^1.13.2
util ^0.12.4
vue ^2.7.8
vue-infinite-scroll ^2.0.2
vue-multiselect ^2.1.6
vue-observe-visibility ^1.0.0
vue-prismjs ^1.2.0
vue-router ^3.6.5
vue-rx ^6.2.0
vue-virtual-scroll-list ^2.3.4
vuedraggable 2.24.3
vuex ^3.6.2
vuex-cache ^3.4.0
vuex-persist 2.3
winbox ^0.2.4
xml-beautifier ^0.5.0

client/Dockerfile docker

digitallyseamless/nodejs-bower-grunt latest build

config/plugins/visualizations/PCA_3Dplot/package.json npm

d3 ^7.4.4
pca-js ^1.0.2
plotly.js ^2.11.1

config/plugins/visualizations/annotate_image/package.json npm

babel-preset-env ^1.6.1
backbone ^1.3.3
jquery ^3.3.1
jquery-contextmenu ^2.7.1
jquery.ui.position ^1.11.4
paper ^0.12.3
parcel-bundler ^1.4.1
underscore ^1.8.3

config/plugins/visualizations/chiraviz/package.json npm

copy-webpack-plugin ^5.1.1 development
css-loader ^3.4.2 development
file ^0.2.2 development
file-loader ^5.0.2 development
mini-css-extract-plugin ^0.9.0 development
script-loader ^0.7.2 development
system ^2.0.1 development
url-loader ^4.0.0 development
webpack ^4.42.1 development
webpack-cli ^3.3.11 development
bootstrap 3.3.7
font-awesome ^4.7.0
jquery 3.2.1
plotly.js ^1.52.3
underscore 1.8.3

config/plugins/visualizations/cytoscape/package.json npm

babel-preset-env ^1.6.1
backbone ^1.3.3
bootstrap ^3.3.7
cytoscape ^3.2.8
jquery ^3.1.1
parcel-bundler ^1.4.1

config/plugins/visualizations/drawrna/package.json npm

babel-preset-env ^1.6.1
backbone ^1.3.3
bootstrap ^3.3.7
drawrnajs ^1.2.6
jquery ^3.1.1
parcel-bundler ^1.4.1

config/plugins/visualizations/editor/package.json npm

css-loader ^3.4.2 development
extract-text-webpack-plugin ^3.0.2 development
file-loader ^5.0.2 development
mini-css-extract-plugin ^0.9.0 development
style-loader ^1.1.3 development
webpack ^4.41.6 development
webpack-cli ^3.3.11 development
ace-builds ^1.4.8

config/plugins/visualizations/example/package.json npm

@galaxyproject/charts ^0.0.6
babel-preset-env ^1.6.1
backbone ^1.3.3
bootstrap ^3.3.7
d3 ^4.12.2
jquery ^3.1.1
parcel-bundler ^1.4.1
underscore ^1.8.3

config/plugins/visualizations/heatmap/heatmap_default/package.json npm

@galaxyproject/charts ^0.0.6
babel-preset-env ^1.6.1
backbone ^1.4.0
bootstrap ^3.3.7
d3 3
jquery ^3.5.1
parcel-bundler ^1.4.1
underscore ^1.11.0

config/plugins/visualizations/hyphyvision/package.json npm

css-loader ^3.4.2 development
expose-loader ^0.7.5 development
file-loader ^5.0.2 development
hyphy-vision 2.6.3 development
mini-css-extract-plugin ^0.9.0 development
phylotree 0.1.6 development
style-loader ^1.1.3 development
webpack ^4.41.6 development
webpack-cli ^3.3.11 development
fbjs ^1.0.0
underscore ^1.9.2

config/plugins/visualizations/jqplot/jqplot_bar/package.json npm

@galaxyproject/charts ^0.0.6
babel-preset-env ^1.6.1
backbone ^1.3.3
bootstrap ^3.3.7
d3 ^4.12.2
jqplot-exported ^1.0.9-pm.9
jquery ^3.1.1
parcel-bundler ^1.4.1
underscore ^1.13.1

config/plugins/visualizations/media_player/package.json npm

plyr ^3.6.2

config/plugins/visualizations/msa/package.json npm

babel-plugin-transform-export-extensions ^6.22.0
babel-preset-env ^1.6.1
parcel-bundler ^1.4.1

config/plugins/visualizations/mvpapp/package.json npm

clean-webpack-plugin ^3.0.0 development
copy-webpack-plugin ^6.0.3 development
css-loader ^3.4.2 development
extract-text-webpack-plugin ^3.0.2 development
file ^0.2.2 development
file-loader ^5.0.2 development
mini-css-extract-plugin ^0.9.0 development
script-loader ^0.7.2 development
style-loader ^1.2.0 development
system ^2.0.1 development
url-loader ^4.0.0 development
webpack ^4.42.1 development
webpack-cli ^3.3.11 development
bootstrap 3
igv ^2.6.6

config/plugins/visualizations/ngl/package.json npm

babel-preset-env ^1.6.1
backbone ^1.3.3
bootstrap ^3.3.7
jquery ^3.1.1
ngl ^0.10.4
parcel-bundler ^1.4.1

config/plugins/visualizations/nora/package.json npm

@galaxyproject/nora 1.1.2
cpy-cli ^3.1.1

config/plugins/visualizations/nvd3/nvd3_bar/package.json npm

babel-core ^6.26.3 development
@galaxyproject/charts ^0.0.6
babel-preset-env ^1.6.1
backbone ^1.3.3
bootstrap ^3.3.7
d3 ^3.4.5
jquery ^3.3.1
nvd3 ^1.8.6
parcel-bundler ^1.4.1
underscore ^1.8.3

config/plugins/visualizations/openlayers/package.json npm

axios ^0.19.0
babel-preset-env ^1.6.1
backbone ^1.3.3
bootstrap ^3.3.7
file-saver ^2.0.2
jquery ^3.3.1
jszip ^3.2.2
jszip-utils ^0.1.0
ol ^5.3.3
parcel-bundler ^1.4.1
proj4 ^2.5.0
shpjs ^3.4.3
underscore ^1.8.3

config/plugins/visualizations/openseadragon/package.json npm

cpy-cli ^3.1.1
openseadragon ^2.4.2

config/plugins/visualizations/phylocanvas/package.json npm

@phylocanvas/phylocanvas.gl ^1.48.0
babel-preset-env ^1.6.1
deck.gl ^8.8.23
parcel-bundler ^1.4.1

config/plugins/visualizations/pv/package.json npm

bio-pv ^1.8.1
parcel-bundler ^1.12.4

config/plugins/visualizations/scatterplot/package.json npm

babel-core ^6.26.3 development
babel-plugin-auto-import ^0.7.1
babel-preset-env ^1.6.1
backbone ^1.3.3
bootstrap ^3.3.7
d3 ^3.5.17
jquery ^3.2.1
jquery-ui-bundle ^1.12.1-migrate
parcel-bundler ^1.6.2
underscore ^1.8.3

config/plugins/visualizations/ts_visjs/package.json npm

vis ^4.21.0

config/plugins/visualizations/venn/package.json npm

@galaxyproject/charts ^0.0.6
babel-preset-env ^1.6.1
backbone ^1.3.3
bootstrap ^3.3.7
d3 ^3.4.5
jquery ^3.1.1
parcel-bundler ^1.4.1
underscore ^1.13.1

config/plugins/webhooks/demo/tour_generator/package.json npm

backbone ^1.3.3
parcel-bundler ^1.10.3
toastr ^2.1.4

config/plugins/welcome_page/new_user/package.json npm

copy-webpack-plugin ^11.0.0 development
file-loader ^6.2.0 development
webpack ^5.75.0 development
webpack-cli ^4.10.0 development
@galaxyproject/new_user_welcome ^1.0.6

.github/workflows/publish_artifacts.yaml actions

actions/checkout v3 composite
actions/setup-python v4 composite

.github/workflows/setup_selenium.yaml actions

nanasess/setup-chromedriver v2 composite

.github/workflows/test_galaxy_packages_for_pulsar.yaml actions

actions/cache v3 composite
actions/checkout v3 composite
actions/setup-python v4 composite
eWaterCycle/setup-apptainer v2 composite

config/plugins/visualizations/fits_image_viewer/package.json npm

aladin-lite-galaxy ^1.0.0
parcel-bundler ^1.4.1

client/yarn.lock npm

1593 dependencies

Ecosyste.ms: Repos

GitHub / assuntad23 / galaxy

Files

Dependencies