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GitHub / broadinstitute / single_cell_portal_core
Rails/Docker application for the Broad Institute's single cell RNA-seq data portal
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/broadinstitute%2Fsingle_cell_portal_core
Stars: 60
Forks: 25
Open Issues: 2
License: bsd-3-clause
Language: Ruby
Repo Size: 37.9 MB
Dependencies:
2,501
Created: about 8 years ago
Updated: 1 day ago
Last pushed: 3 days ago
Last synced: 3 days ago
Topics: human-cell-atlas, rna-seq-analysis, single-cell-genomics
Files
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Readme
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Dependencies
package.json
npm
- @babel/plugin-proposal-private-property-in-object ^7.16.0 development
- @rollup/plugin-inject ^4.0.4 development
- @sheerun/mutationobserver-shim ^0.3.3 development
- @testing-library/jest-dom ^5.14.1 development
- @testing-library/react ^10.0.4 development
- babel-eslint ^10.0.3 development
- babel-loader ^8.2.2 development
- browser-cache-mock ^0.1.7 development
- enzyme ^3.11.0 development
- enzyme-adapter-react-16 ^1.15.2 development
- eslint ^6.8.0 development
- eslint-config-google ^0.14.0 development
- eslint-config-prettier ^6.10.0 development
- eslint-plugin-import ^2.20.1 development
- eslint-plugin-jest ^23.8.2 development
- eslint-plugin-jsx-a11y * development
- eslint-plugin-prettier ^3.1.2 development
- eslint-plugin-react ^7.18.3 development
- husky ^4.2.5 development
- isomorphic-fetch ^3.0.0 development
- jest ^26.0.1 development
- jest-environment-enzyme ^7.1.2 development
- jest-enzyme ^7.1.2 development
- jest-fetch-mock ^3.0.3 development
- jest-location-mock ^1.0.9 development
- node-fetch ^2.6.1 development
- prettier ^1.19.1 development
- prettier-eslint ^11.0.0 development
- prop-types ^15.7.2 development
- react-select-event ^5.3.0 development
- stylelint-prettier ^1.1.2 development
- vite ^2.9.13 development
- vite-plugin-ruby ^3.0.5 development
- @babel/plugin-transform-runtime ^7.17.0
- @babel/preset-react ^7.8.3
- @databiosphere/bard-client ^0.1.0
- @fortawesome/fontawesome-svg-core ^1.2.26
- @fortawesome/free-solid-svg-icons ^5.12.0
- @fortawesome/react-fontawesome ^0.1.8
- @fullhuman/postcss-purgecss ^4.0.3
- @reach/router ^1.3.3
- @sentry/react ^6.19.6
- @sentry/tracing ^6.19.6
- @single-cell-portal/igv 2.6.4-beta.1
- @vitejs/plugin-react ^1.2.0
- babel-plugin-transform-react-remove-prop-types ^0.4.24
- camelcase-keys ^6.1.2
- core-js ^3.6.4
- exifreader 4.6.0
- fflate ^0.7.3
- ideogram 1.41.0
- jquery 3.5.1
- jquery-ui 1.13.2
- morpheus-app 1.0.18
- plotly.js-dist 2.2.0
- pluralize ^8.0.0
- postcss ^8.2.10
- postcss-import ^14.0.2
- postcss-loader ^4.0.3
- prop-types ^15.7.2
- query-string ^6.11.0
- react ^17.0.2
- react-bootstrap ^0.33.1
- react-colorful ^5.5.1
- react-compound-slider ^3.0.0-beta.1
- react-dom ^16.12.0
- react-notifications-component 3.4.1
- react-scripts ^5.0.1
- react-select ^5.2.2
- react-switch 6.0.0
- react-table ^7.7.0
- sass ^1.37.5
- spearman-rho ^1.0.6
- spin.js ^4.0.0
- string-similarity ^4.0.4
- stylelint-config-sass-guidelines ^9.0.0
- web-vitals ^1.1.1
- actions/checkout v2 composite
- tj-actions/changed-files v35.4.4 composite
Gemfile
rubygems
- brakeman >= 0 development
- byebug >= 0 development
- factory_bot_rails >= 0 development
- flamegraph >= 0 development
- listen >= 0 development
- memory_profiler >= 0 development
- minitest-hooks >= 0 development
- puma >= 0 development
- rack-mini-profiler >= 0 development
- rubocop >= 0 development
- rubocop-rails >= 0 development
- sdoc >= 0 development
- simplecov >= 0 development
- simplecov-lcov >= 0 development
- stackprof >= 0 development
- test-unit >= 0 development
- bootsnap >= 0
- bootstrap-sass >= 0
- browser >= 0
- bson_ext >= 0
- carrierwave ~> 2.0
- carrierwave-mongoid >= 0
- coffee-rails >= 0
- daemons >= 0
- delayed_job >= 0
- delayed_job_mongoid >= 0
- devise >= 0
- exponential-backoff >= 0
- font-awesome-sass >= 0
- gibberish >= 0
- google-api-client >= 0
- google-cloud-bigquery >= 0
- google-cloud-storage >= 0
- googleauth >= 0
- jbuilder ~> 2.7
- jquery-datatables-rails >= 0
- jquery-fileupload-rails >= 0
- jquery-rails >= 0
- minitest = 5.15.0
- minitest-rails >= 0
- minitest-reporters >= 0
- mongoid >= 0
- mongoid-encrypted-fields >= 0
- mongoid-history >= 0
- mongoid_rails_migrations >= 0
- naturally >= 0
- nested_form >= 0
- net-imap >= 0
- net-pop >= 0
- net-smtp >= 0
- omniauth-google-oauth2 >= 0
- omniauth-rails_csrf_protection >= 0
- parallel >= 0
- rack-brotli >= 0
- rails = 6.1.7.1
- rest-client >= 0
- ruby-prof >= 0
- ruby-prof-flamegraph >= 0
- ruby_native_statistics >= 0
- rubyzip >= 0
- sass-rails >= 6
- secure_headers >= 0
- sentry-raven >= 0
- swagger-blocks >= 0
- sys-filesystem >= 0
- tcell_agent >= 0
- time_difference >= 0
- truncate_html >= 0
- uuid >= 0
- vite_rails >= 0
- will_paginate >= 0
- will_paginate_mongoid >= 0
Dockerfile
docker
image-pipeline/Dockerfile
docker
- marketplace.gcr.io/google/ubuntu2004 latest build
- jsfive 0.3.13
- koj-co/delete-merged-action master composite
- @babel/plugin-proposal-private-property-in-object ^7.16.0 development
- @rollup/plugin-inject ^4.0.4 development
- babel-eslint ^10.0.3 development
- babel-loader ^8.2.2 development
- eslint ^6.8.0 development
- eslint-config-google ^0.14.0 development
- eslint-config-prettier ^6.10.0 development
- eslint-plugin-import ^2.20.1 development
- eslint-plugin-prettier ^3.1.2 development
- prettier ^1.19.1 development
- prettier-eslint ^11.0.0 development
- @babel/plugin-transform-runtime ^7.17.0
- @babel/preset-react ^7.8.3
- @databiosphere/bard-client ^0.1.0
- @google-cloud/storage ^6.4.2
- core-js ^3.6.4
- exifreader 4.5.1
- fflate ^0.7.3
- puppeteer ^15.4.0
- sharp 0.30.7
- koj-co/delete-merged-action master composite
Gemfile.lock
rubygems