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GitHub / egeulgen / pathfindR
pathfindR: Enrichment Analysis Utilizing Active Subnetworks
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/egeulgen%2FpathfindR
Stars: 167
Forks: 25
Open Issues: 0
License: other
Language: R
Repo Size: 351 MB
Dependencies:
22
Created: over 6 years ago
Updated: 28 days ago
Last pushed: 28 days ago
Last synced: 25 days ago
Commit Stats
Commits: 991
Authors: 5
Mean commits per author: 198.2
Development Distribution Score: 0.016
More commit stats: https://commits.ecosyste.ms/hosts/GitHub/repositories/egeulgen/pathfindR
Topics: active-subnetworks, enrichment, pathway, pathway-enrichment-analysis, r, subnetwork
Files
Dependencies
- R >= 4.0 depends
- pathfindR.data * depends
- AnnotationDbi * imports
- DBI * imports
- KEGGREST * imports
- KEGGgraph * imports
- R.utils * imports
- doParallel * imports
- foreach * imports
- fpc * imports
- ggplot2 * imports
- ggraph * imports
- ggupset * imports
- grDevices * imports
- igraph * imports
- knitr * imports
- magick * imports
- msigdbr * imports
- org.Hs.eg.db * imports
- rmarkdown * imports
- covr * suggests
- testthat >= 2.3.2 suggests