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GitHub / enviro-lab / ncbi-submit
A tool to prepare files and run/monitor programmatic submissions to NCBI
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/enviro-lab%2Fncbi-submit
Stars: 2
Forks: 0
Open Issues: 0
License: mit
Language: Python
Repo Size: 549 KB
Dependencies:
86
Created: over 1 year ago
Updated: 28 days ago
Last pushed: 3 months ago
Last synced: 22 days ago
Commit Stats
Commits: 32
Authors: 4
Mean commits per author: 8.0
Development Distribution Score: 0.219
More commit stats: https://commits.ecosyste.ms/hosts/GitHub/repositories/enviro-lab/ncbi-submit
Topics: ftp, ncbi, ncbi-biosamples, ncbi-genbank, ncbi-sra, submission, upload
Files
Dependencies
- AppKit ==0.2.8
- ConfigParser ==5.3.0
- Cython ==0.29.21
- Foundation ==0.1.0a0.dev1
- HTMLParser ==0.0.2
- MarkupSafe ==2.1.0
- MySQL-python ==1.2.5
- Numeric ==24.2
- Pillow ==9.4.0
- PyInstaller ==5.8.0
- PyQt4 ==4.11.4
- PyQt5 ==5.15.9
- QtPy ==2.0.1
- SQLAlchemy ==1.4.31
- XlsxWriter ==3.0.3
- beautifulsoup4 ==4.11.2
- boto3 ==1.26.80
- botocore ==1.29.80
- brotli ==1.0.9
- brotlicffi ==1.0.9.2
- brotlipy ==0.7.0
- cftime ==1.6.2
- cryptography ==36.0.1
- cycler ==0.11.0
- dask ==2022.2.1
- dl ==0.1.0
- docutils ==0.17.1
- fastparquet ==2023.2.0
- fsspec ==2022.2.0
- genapi ==0.0.8
- hypothesis ==6.68.2
- importlib_metadata ==4.11.2
- ipaddr ==2.2.0
- ipython ==8.11.0
- keyring ==23.4.0
- lockfile ==0.12.2
- lxml ==4.6.3
- matplotlib ==3.5.1
- mock ==4.0.3
- mtrand ==0.1
- mypy ==1.0.1
- mypy_extensions ==0.4.3
- networkx ==2.6.3
- nose ==1.3.7
- numarray ==1.5.1
- numexpr ==2.7.3
- odfpy ==1.4.1
- openpyxl ==3.0.9
- ordereddict ==1.1
- pickle5 ==0.0.12
- protobuf ==4.22.0
- psutil ==5.9.0
- psycopg2 ==2.9.5
- pyOpenSSL ==23.0.0
- pymysql ==1.0.2
- pytest ==7.0.1
- pyxlsb ==1.0.10
- rdflib ==6.2.0
- reportlab ==3.6.12
- s3fs ==2023.1.0
- scikit_learn ==1.2.1
- scipy ==1.5.2
- sets ==0.3.2
- simplejson ==3.18.3
- spark_nlp ==3.1.2
- statsmodels ==0.13.2
- tables ==3.6.1
- threadpoolctl ==3.1.0
- traitlets ==5.1.1
- typing_extensions ==4.5.0
- urllib3_secure_extra ==0.1.0
- wincertstore ==0.2.1
- xarray ==2023.2.0
- xlrd ==2.0.1
- xlwt ==1.3.0
- xmlrpclib ==1.0.1
- zipp ==3.7.0