GitHub / epigen / genome_tracks
A Snakemake workflow and MrBiomics module for easy visualization of genome browser tracks of aligned BAM files (e.g., RNA-seq, ATAC-seq, scRNA-seq, ...) powered by the wrapper gtracks for the package pyGenomeTracks, and IGV-reports.
JSON API: http://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/epigen%2Fgenome_tracks
PURL: pkg:github/epigen/genome_tracks
Stars: 24
Forks: 1
Open issues: 2
License: mit
Language: Python
Size: 89.8 KB
Dependencies parsed at: Pending
Created at: over 3 years ago
Updated at: about 1 month ago
Pushed at: about 1 month ago
Last synced at: about 1 month ago
Topics: atac-seq, bioinformatics, biomedical-data-science, genome-browser, genome-track, genomic-regions, pipeline, python, rna-seq, scrna-seq, snakemake, visualization, workflow