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GitHub / epurdom / clusterExperiment
R package of techniques for comparing clusterings of single-cell sequencing data
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/epurdom%2FclusterExperiment
Stars: 36
Forks: 13
Open Issues: 53
License: None
Language: R
Repo Size: 179 MB
Dependencies:
39
Created: over 8 years ago
Updated: 9 months ago
Last pushed: over 1 year ago
Last synced: 6 months ago
Files
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Readme
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Dependencies
DESCRIPTION
cran
- BiocGenerics * depends
- R >= 3.6.0 depends
- SingleCellExperiment * depends
- SummarizedExperiment >= 1.15.4 depends
- BiocSingular * imports
- DelayedArray >= 0.7.48 imports
- HDF5Array >= 1.7.10 imports
- Matrix * imports
- NMF * imports
- RColorBrewer * imports
- Rcpp * imports
- S4Vectors * imports
- ape >= 5.0 imports
- cluster * imports
- edgeR * imports
- grDevices * imports
- graphics * imports
- howmany * imports
- kernlab * imports
- limma * imports
- locfdr * imports
- matrixStats * imports
- mbkmeans * imports
- methods * imports
- parallel * imports
- phylobase * imports
- pracma * imports
- scales * imports
- stats * imports
- stringr * imports
- zinbwave * imports
- BiocStyle * suggests
- MAST * suggests
- Rtsne * suggests
- igraph * suggests
- knitr * suggests
- rmarkdown * suggests
- scran * suggests
- testthat * suggests