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GitHub / genepi / cloudgene

A framework to build Software As A Service (SaaS) platforms for data analysis pipelines.

JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/genepi%2Fcloudgene

Stars: 35
Forks: 18
Open Issues: 25

License: agpl-3.0
Language: Java
Repo Size: 15.4 MB
Dependencies: 567

Created: over 6 years ago
Updated: about 1 month ago
Last pushed: about 1 month ago
Last synced: about 1 month ago

Topics: analysis-pipeline, cloudgene, cloudgene-saas, docker, hadoop

Files

Readme

Dependencies

pom.xml maven

com.amazonaws:aws-java-sdk-bom 1.12.153 import
cloudgene:cloudgene-java-sdk 1.0.2
com.amazonaws:aws-java-sdk-s3
com.amazonaws:aws-java-sdk-sts
com.esotericsoftware.yamlbeans:yamlbeans 1.15
com.google.guava:guava 31.0.1-jre
com.h2database:h2 2.1.210
com.jcraft:jsch 0.1.55
com.nimbusds:nimbus-jose-jwt 9.19
com.sun.mail:javax.mail 1.6.2
commons-io:commons-io 2.11.0
genepi:genepi-db 1.2.1
genepi:genepi-hadoop mr1-1.4.1
genepi:genepi-io 1.2.0
mysql:mysql-connector-java 8.0.28
net.gpedro.integrations.slack:slack-webhook 1.4.0
net.lingala.zip4j:zip4j 2.11.1
net.sf.json-lib:json-lib 2.4
org.apache.ivy:ivy 2.5.0
org.apache.logging.log4j:log4j-api 2.17.1
org.apache.logging.log4j:log4j-core 2.17.1
org.apache.logging.log4j:log4j-jcl 2.17.1
org.apache.logging.log4j:log4j-slf4j-impl 2.17.1
org.apache.velocity:velocity 1.7
org.codehaus.groovy:groovy-all 3.0.9
org.quartz-scheduler:quartz 2.3.2
org.quartz-scheduler:quartz-jobs 2.3.2
org.restlet.jee:org.restlet.ext.fileupload 2.3.12
org.restlet.jee:org.restlet.ext.freemarker 2.3.12
org.restlet.jee:org.restlet.ext.html 2.3.12
org.restlet.jee:org.restlet.ext.slf4j 2.3.12
org.restlet.jse:org.restlet 2.3.12
org.restlet.jse:org.restlet.ext.jetty 2.3.12
org.restlet.jse:org.restlet.ext.json 2.3.12
org.springframework.security:spring-security-crypto 5.6.1
dumbster:dumbster 1.6 test
junit:junit 4.8.1 test
org.apache.hadoop:hadoop-common 2.6.0-cdh5.16.1 test
org.apache.hadoop:hadoop-hdfs 2.6.0-cdh5.16.1 test
org.apache.hadoop:hadoop-test 2.6.0-mr1-cdh5.16.1 test
org.apache.sshd:sshd-sftp 0.9.0 test
org.bouncycastle:bcprov-jdk15on 1.58 test

src/main/html/webapp/package.json npm

steal-css ^1.3.2 development
steal-less ^1.3.1 development
steal-stache 3.1.3 development
steal-tools ^1.8.4 development
@fortawesome/fontawesome-free 5.3.1
ansi_up 4.0.4
bootbox 4.4.0
bootstrap 4.1.3
can-ajax 1.1.4
can-connect 1.5.18
can-control 3.2.4
can-deparam 1.0.3
can-list 3.2.2
can-map 3.4.2
can-map-define 3.1.2
can-route 3.3.4
can-stache 3.14.22
can-util 3.12.0
dateformat 3.0.3
jquery 3.3.1
jquery-form 3.50.0
md5 2.2.1
morris.js 0.5.0
popper.js 1.14.3
raphael 2.2.7
steal ^1.5.13

.github/workflows/create-release.yml actions

actions/checkout v2 composite
actions/setup-java v2 composite
ncipollo/release-action v1 composite

.github/workflows/maven-test.yml actions

actions/checkout v2 composite
actions/setup-java v2 composite
codecov/codecov-action v2 composite

Dockerfile docker

genepi/cdh5-hadoop-mrv1 latest build

src/main/html/webapp/package-lock.json npm

492 dependencies