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GitHub / idrblab / socube
A simple python package for doublet detection in scRNA-seq data. This repo is read-only, please visit GCS-ZHN/socube to submit issue and PR.
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/idrblab%2Fsocube
Fork of GCS-ZHN/socube
Stars: 1
Forks: 0
Open Issues: 0
License: mit
Language: Python
Repo Size: 3.53 MB
Dependencies:
36
Created: almost 2 years ago
Updated: almost 2 years ago
Last pushed: over 1 year ago
Last synced: over 1 year ago
Topics: deeplearning, doublet-detection, end-to-end-encryption, omics, scrna-seq
Files
Dependencies
- actions/checkout v3 composite
- actions/setup-python v4 composite
- pypa/gh-action-pypi-publish release/v1 composite
- softprops/action-gh-release v1 composite
- actions/checkout v3 composite
- aormsby/Fork-Sync-With-Upstream-action v3.2 composite
- pytorch/pytorch 1.11.0-cuda11.3-cudnn8-runtime build
- pytorch/pytorch 1.11.0-cuda11.3-cudnn8-runtime build
- anndata >=0.7.8
- lapjv >=1.3.1
- matplotlib >=3.5.0
- numpy >=1.20.1
- pandas >=1.3.4
- python-highcharts >=0.4.2
- scanpy >=1.8.2
- scikit-learn >=1.0.1
- scipy >=1.7.3
- tables <=3.6.1
- torch >=1.8.1
- torchvision >=0.9.1
- tqdm >=4.62.3
- umap-learn >=0.5.2
- anndata >=0.7.8
- lapjv >=1.3.1
- matplotlib >=3.5.0
- numpy >=1.20.1
- pandas >=1.3.4
- python-highcharts >=0.4.2
- scanpy >=1.8.2
- scikit-learn >=1.0.1
- scipy >=1.7.3
- tables <=3.6.1
- torch >=1.8.1
- torchvision >=0.9.1
- tqdm >=4.62.3
- umap-learn >=0.5.2