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GitHub / kclhi / phenoflow
Standardise and share computable disease definitions
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/kclhi%2Fphenoflow
Stars: 7
Forks: 7
Open Issues: 16
License: mit
Language: JavaScript
Repo Size: 2.72 MB
Dependencies:
690
Created: about 4 years ago
Updated: 4 months ago
Last pushed: 3 months ago
Last synced: about 1 month ago
Topics: common-workflow-language, phenomics, phenotyping
Files
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Readme
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Dependencies
- i2b2/i2b2-pg p1
- i2b2/i2b2-web p1
- i2b2/i2b2-wildfly 0.1
- fs 0.0.1-security
- node-git-server ^0.6.0
web/package.json
npm
- chai ^4.3.6 development
- chai-http ^4.3.0 development
- mocha ^9.2.2 development
- proxyquire ^2.1.3 development
- sqlite3 github:mapbox/node-sqlite3#593c9d development
- adm-zip ^0.5.9
- archiver ^5.3.0
- await-spawn ^4.0.2
- bcrypt ^5.0.1
- body-parser ^1.19.2
- compromise ^14.0.0
- compromise-adjectives ^0.0.7
- config ^3.3.7
- cookie-parser ^1.4.6
- debug ^4.3.4
- dotenv ^16.0.0
- express ^4.17.3
- express-fileupload ^1.3.1
- express-jwt ^6.1.1
- fast-xml-parser ^3.21.1
- fs ^0.0.1-security
- got ^11.8.2
- he ^1.2.0
- http-errors ^2.0.0
- isomorphic-git ^1.17.0
- jsonwebtoken ^8.5.1
- markdown-to-json ^0.5.4
- morgan ^1.10.0
- mysql2 ^2.3.3
- natural ^5.1.13
- neat-csv ^6.0.1
- node-cron ^3.0.0
- pug ^3.0.2
- python-shell ^3.0.1
- sanitize-html ^2.7.0
- sequelize ^6.17.0
- sequelize-cli ^6.4.1
- string-similarity ^4.0.4
- swagger-jsdoc ^6.1.0
- swagger-ui-express ^4.3.0
- winston ^3.6.0
- yaml ^1.10.2
- PyYAML ==6.0
- Pygments ==2.10.0
- SecretStorage ==3.3.1
- anyio ==3.4.0
- asgiref ==3.4.1
- bleach ==4.1.0
- certifi ==2021.10.8
- cffi ==1.15.0
- chardet ==4.0.0
- charset-normalizer ==2.0.8
- click ==8.0.3
- colorama ==0.4.4
- cryptography ==36.0.0
- cwlgen-kclhi ==0.4.0
- docutils ==0.18.1
- gitdb ==4.0.9
- h11 ==0.12.0
- httptools ==0.3.0
- idna ==3.3
- importlib-metadata ==4.8.2
- jeepney ==0.7.1
- keyring ==23.4.0
- nodeenv ==1.6.0
- nose ==1.3.7
- oyaml ==1.0
- packaging ==21.3
- pip-review ==1.1.0
- pkginfo ==1.8.1
- pycparser ==2.21
- pyparsing ==3.0.6
- readme-renderer ==30.0
- requests ==2.26.0
- requests-toolbelt ==0.9.1
- rfc3986 ==1.5.0
- ruamel.yaml ==0.16.5
- six ==1.16.0
- smmap ==5.0.0
- sniffio ==1.2.0
- starlette ==0.17.1
- tqdm ==4.62.3
- twine ==3.6.0
- urllib3 ==1.26.7
- uvicorn ==0.15.0
- uvloop ==0.16.0
- webencodings ==0.5.1
- websockets ==10.1
- zipp ==3.6.0
web/requirements.txt
pypi
- adm-zip *
- archiver *
- await-spawn *
- bcrypt *
- body-parser *
- chai *
- chai-http *
- compromise *
- compromise-adjectives *
- config *
- cookie-parser *
- debug *
- dotenv *
- express *
- express-fileupload *
- express-jwt *
- fast-xml-parser *
- fs *
- got *
- he *
- http-errors *
- isomorphic-git *
- jsonwebtoken *
- markdown-to-json *
- mocha *
- morgan *
- mysql2 *
- natural *
- neat-csv *
- node-cron *
- proxyquire *
- pug *
- python-shell *
- sanitize-html *
- sequelize *
- sequelize-cli *
- sqlite3 *
- string-similarity *
- swagger-jsdoc *
- swagger-ui-express *
- winston *
- yaml *
web/Dockerfile
docker
- node 11 build
web/db/Dockerfile
docker
- mariadb 10 build
docker-compose.dev.yml
docker
- kclhi/phenoflow_generator release
- kclhi/phenoflow_webapp release
docker-compose.yml
docker
- phenoflow_webapp latest
generator/Dockerfile
docker
- tiangolo/uvicorn-gunicorn-starlette python3.7 build
- ubuntu 16.04 build
- node 14 build
- python latest build
- mongo 3.4
- stain/jena-fuseki 3.4.0
- mongo 3.4
- stain/jena-fuseki 3.4.0
- node 11 build
visualiser/spring/Dockerfile
docker
- commonworkflowlanguage/cwlviewer v1.2.1 build
web/proxy/Dockerfile
docker
- nginx latest build