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GitHub / lambda-science / MyoQuant
MyoQuant🔬: a tool to automatically quantify pathological features in muscle fiber histology images. Demo version deployed at: https://lbgi.fr/MyoQuant
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/lambda-science%2FMyoQuant
Stars: 2
Forks: 1
Open Issues: 6
License: agpl-3.0
Language: Python
Repo Size: 3.75 MB
Dependencies:
88
Created: over 1 year ago
Updated: about 2 months ago
Last pushed: about 2 months ago
Last synced: 2 days ago
Topics: computer-vision, deep-learning, disease, histology, image, medecine, python, pytorch, quantification, tensorflow
Files
Dependencies
- absl-py 1.3.0
- astunparse 1.6.3
- cachetools 5.2.0
- cellpose 2.1.0
- certifi 2022.9.24
- charset-normalizer 2.1.1
- click 8.1.3
- colorama 0.4.6
- commonmark 0.9.1
- contourpy 1.0.5
- csbdeep 0.7.2
- cycler 0.11.0
- fastremap 1.13.3
- flatbuffers 22.9.24
- fonttools 4.38.0
- gast 0.4.0
- google-auth 2.13.0
- google-auth-oauthlib 0.4.6
- google-pasta 0.2.0
- grpcio 1.50.0
- h5py 3.7.0
- idna 3.4
- imagecodecs 2022.9.26
- imageio 2.22.2
- importlib-metadata 5.0.0
- keras 2.10.0
- keras-preprocessing 1.1.2
- kiwisolver 1.4.4
- libclang 14.0.6
- llvmlite 0.39.1
- markdown 3.4.1
- markupsafe 2.1.1
- matplotlib 3.6.1
- natsort 8.2.0
- networkx 2.8.7
- numba 0.56.3
- numpy 1.23.4
- oauthlib 3.2.2
- opencv-python-headless 4.6.0.66
- opt-einsum 3.3.0
- packaging 21.3
- pandas 1.5.1
- pillow 9.2.0
- protobuf 3.19.6
- pyasn1 0.4.8
- pyasn1-modules 0.2.8
- pygments 2.13.0
- pyparsing 3.0.9
- python-dateutil 2.8.2
- pytz 2022.5
- pywavelets 1.4.1
- requests 2.28.1
- requests-oauthlib 1.3.1
- rich 12.6.0
- rsa 4.9
- scikit-image 0.19.3
- scipy 1.9.3
- setuptools-scm 7.0.5
- six 1.16.0
- stardist 0.8.3
- tensorboard 2.10.1
- tensorboard-data-server 0.6.1
- tensorboard-plugin-wit 1.8.1
- tensorflow 2.10.0
- tensorflow-estimator 2.10.0
- tensorflow-io-gcs-filesystem 0.27.0
- termcolor 2.0.1
- tifffile 2022.10.10
- tomli 2.0.1
- torch 1.12.1+cu116
- tqdm 4.64.1
- typer 0.6.1
- typing-extensions 4.4.0
- urllib3 1.26.12
- werkzeug 2.2.2
- wrapt 1.14.1
- zipp 3.10.0