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GitHub / lifebit-ai / gwas
GWAS pipeline using SAIGE
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/lifebit-ai%2Fgwas
Stars: 5
Forks: 2
Open Issues: 51
License: None
Language: R
Repo Size: 37.4 MB
Dependencies:
30
Created: almost 4 years ago
Updated: about 1 month ago
Last pushed: about 1 year ago
Last synced: about 1 month ago
Files
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Readme
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Dependencies
environment.yml
conda
- bioconductor-biobase
- bioconductor-gwascat
- bioconductor-gwastools
- cairo
- fastqc 0.11.8.*
- fonts-anaconda 1.*
- jupytext
- markdown 3.1.1.*
- multiqc 1.7.*
- plink
- pygments 2.5.2.*
- pymdown-extensions 6.0.*
- python 3.7.3.*
- r-base
- r-data.table
- r-devtools
- r-dplyr
- r-dt
- r-ggplot2
- r-ggpubr
- r-htmltools
- r-irkernel
- r-kableextra
- r-magrittr
- r-plyr
- r-purrr
- r-qqman
- r-rmarkdown
- r-snakecase
- r-stringr