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GitHub / lifebit-ai / rnaseq
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/lifebit-ai%2Frnaseq
Stars: 1
Forks: 0
Open Issues: 1
License: mit
Language: Roff
Repo Size: 5.36 MB
Dependencies:
18
Created: almost 6 years ago
Updated: about 1 month ago
Last pushed: almost 6 years ago
Last synced: about 1 month ago
Files
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Readme
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Dependencies
environment.yml
conda
- bioconductor-dupradar 1.8.0.*
- bioconductor-edger 3.20.7.*
- fastqc 0.11.7.*
- hisat2 2.1.0.*
- multiqc 1.5.*
- openjdk 8.0.144.*
- picard 2.18.7.*
- preseq 2.0.3.*
- r-data.table 1.11.4.*
- r-gplots 3.0.1.*
- r-markdown 0.8.*
- rseqc 2.6.4.*
- samtools 1.8.*
- star 2.6.0c.*
- stringtie 1.3.4.*
- subread 1.6.1.*
- trim-galore 0.4.5.*
Dockerfile
docker
- nfcore/base latest build