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GitHub / maurya-anand / ARA
ARA.v1.6.0
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/maurya-anand%2FARA
Stars: 8
Forks: 1
Open Issues: 0
License: gpl-3.0
Language: Perl
Repo Size: 7.87 MB
Dependencies:
31
Created: about 2 years ago
Updated: 15 days ago
Last pushed: 15 days ago
Last synced: 14 days ago
Topics: bioinformatics, ncbi-sra, pipeline, rna-seq, rnaseq
Files
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Readme
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Dependencies
Dockerfile
docker
- ubuntu 20.04 build
- blast =2.10.1=pl526he19e7b1_3
- bowtie2 =2.4.5=py36hfca12d5_2
- entrez-direct =16.2=he881be0_0
- fastqc =0.11.9=hdfd78af_1
- fastx_toolkit =0.0.14=0
- make =4.3=hd18ef5c_1
- python =3.6.10=h8356626_1011_cpython
- samtools =1.15.1=h1170115_0
- sra-tools =2.10.7=pl526haddd2b5_2
- trimmomatic =0.39=hdfd78af_2
- blast *
- bowtie2 *
- entrez-direct *
- fastqc *
- fastx_toolkit *
- make *
- python =3.6.10
- samtools *
- sra-tools *
- trimmomatic *
- blast =2.12.0=h0370960_3
- bowtie2 =2.4.5=py39he245752_2
- entrez-direct =16.2=h193322a_0
- fastqc =0.11.9=hdfd78af_1
- fastx_toolkit =0.0.14=h589c0e0_9
- make =4.3=h22f3db7_1
- python =3.9.12=h1cc4136_1_cpython
- samtools =1.15.1=h9f30945_0
- sra-tools =2.8.0=0
- trimmomatic =0.39=hdfd78af_2