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GitHub / mazzalab / fastqwiper

An ensamble method to recover corrupted FASTQ files, drop or fix pesky lines, remove unpaired reads, and fix reads interleaving.

JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/mazzalab%2Ffastqwiper

Stars: 16
Forks: 1
Open Issues: 1

License: other
Language: Python
Repo Size: 565 KB
Dependencies: 20

Created: over 3 years ago
Updated: 16 days ago
Last pushed: 14 days ago
Last synced: 14 days ago

Commit Stats

Commits: 192
Authors: 2
Mean commits per author: 96.0
Development Distribution Score: 0.01
More commit stats: https://commits.ecosyste.ms/hosts/GitHub/repositories/mazzalab/fastqwiper

Topics: bioinformatics, corrupted, fastq, fix, ngs, recovery

Files
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    Readme
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    Dependencies
    requirements.txt pypi
    setup.py pypi
    .github/workflows/buildall_and_publish.yml actions
    .github/workflows/code_coverage.yml actions
    .github/workflows/conda_reusable.yml actions
    .github/workflows/docker_reusable.yml actions
    .github/workflows/pypi_reusable.yml actions
    Dockerfile docker
    environment.yml pypi