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GitHub / microsoft / BindVAE
Variational Auto Encoders for learning binding signatures of transcription factors
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/microsoft%2FBindVAE
Stars: 9
Forks: 2
Open Issues: 16
License: mit
Language: Python
Repo Size: 9.41 MB
Dependencies:
69
Created: almost 2 years ago
Updated: 6 months ago
Last pushed: about 2 months ago
Last synced: about 1 month ago
Topics: atac-seq, deep-learning, dna, dna-sequence, machine-learning, motif-discovery, tensorflow, transcription-factor, vae, variational-auto-encoder
Files
Dependencies
- Keras-Preprocessing ==1.1.2
- Markdown ==3.3.6
- PyJWT ==2.3.0
- PySocks ==1.7.1
- Werkzeug ==2.1.1
- absl-py ==1.0.0
- aiohttp ==3.8.1
- aiosignal ==1.2.0
- astunparse ==1.6.3
- async-timeout ==4.0.2
- asynctest ==0.13.0
- attrs ==21.4.0
- blinker ==1.4
- brotlipy ==0.7.0
- cached-property ==1.5.2
- cachetools ==4.2.4
- certifi ==2021.10.8
- cffi ==1.15.0
- charset-normalizer ==2.0.12
- click ==8.1.2
- cloudpickle ==2.0.0
- cryptography ==36.0.2
- decorator ==5.1.1
- dm-tree ==0.1.7
- flatbuffers ==2.0
- frozenlist ==1.3.0
- gast ==0.4.0
- google-auth ==1.35.0
- google-auth-oauthlib ==0.4.6
- google-pasta ==0.2.0
- grpcio ==1.42.0
- h5py ==3.6.0
- idna ==3.3
- importlib-metadata ==4.11.3
- keras ==2.7.0
- multidict ==6.0.2
- numpy ==1.21.6
- oauthlib ==3.2.0
- opt-einsum ==3.3.0
- pandas ==1.3.5
- pip ==22.0.4
- protobuf ==3.19.4
- pyOpenSSL ==22.0.0
- pyasn1 ==0.4.8
- pyasn1-modules ==0.2.7
- pycparser ==2.21
- python-dateutil ==2.8.2
- pytz ==2022.1
- pyu2f ==0.1.5
- requests ==2.27.1
- requests-oauthlib ==1.3.1
- rsa ==4.8
- scipy ==1.7.3
- setuptools ==62.1.0
- six ==1.16.0
- tensorboard ==2.6.0
- tensorboard-data-server ==0.6.0
- tensorboard-plugin-wit ==1.8.1
- tensorflow ==2.7.0
- tensorflow-estimator ==2.7.0
- tensorflow-probability ==0.15.0
- termcolor ==1.1.0
- typing_extensions ==4.2.0
- umap ==0.1.1
- urllib3 ==1.26.9
- wheel ==0.37.1
- wrapt ==1.14.0
- yarl ==1.7.2
- zipp ==3.8.0