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GitHub / monarch-initiative / SilentGenes
"Silent companion" library for performing genome arithmetics with genes and transcripts using Svart
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/monarch-initiative%2FSilentGenes
Stars: 0
Forks: 0
Open Issues: 1
License: bsd-3-clause
Language: Java
Repo Size: 477 KB
Dependencies:
26
Created: over 2 years ago
Updated: over 2 years ago
Last pushed: about 1 year ago
Last synced: 10 months ago
Files
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Readme
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Dependencies
pom.xml
maven
- com.fasterxml.jackson.core:jackson-databind 2.13.3
- com.google.guava:guava 31.0.1-jre
- de.charite.compbio:jannovar-core 0.35
- info.picocli:picocli 4.6.2
- org.apache.commons:commons-csv 1.9.0
- org.monarchinitiative.svart:svart 2.0.0-RC1
- org.slf4j:slf4j-api
- org.slf4j:slf4j-api 1.7.35
- org.hamcrest:hamcrest 2.2 test
- org.junit.jupiter:junit-jupiter 5.8.2 test
- org.slf4j:slf4j-simple test
silent-genes-cli/pom.xml
maven
silent-genes-gtf/pom.xml
maven
- org.monarchinitiative.sgenes:silent-genes-model 0.2.5-SNAPSHOT
silent-genes-io/pom.xml
maven
- com.fasterxml.jackson.core:jackson-databind
- org.monarchinitiative.sgenes:silent-genes-model 0.2.5-SNAPSHOT
- org.monarchinitiative.sgenes:silent-genes-simple 0.2.5-SNAPSHOT test
- com.google.guava:guava
- de.charite.compbio:jannovar-core
- org.monarchinitiative.sgenes:silent-genes-model 0.2.5-SNAPSHOT
- org.monarchinitiative.sgenes:silent-genes-simple 0.2.5-SNAPSHOT test
- org.monarchinitiative.sgenes:silent-genes-model 0.2.5-SNAPSHOT