Ecosyste.ms: Repos
An open API service providing repository metadata for many open source software ecosystems.
GitHub / morrislab / qapa
RNA-seq Quantification of Alternative Polyadenylation
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/morrislab%2Fqapa
Stars: 42
Forks: 9
Open Issues: 10
License: gpl-3.0
Language: Python
Repo Size: 2.79 MB
Dependencies:
20
Created: almost 7 years ago
Updated: 7 months ago
Last pushed: 12 months ago
Last synced: 7 months ago
Files
Loading...
Readme
Loading...
Dependencies
environment.yml
conda
- bedtools 2.27.1.*
- biopython >=1.66
- numpy >=1.10
- pandas >=0.17
- pip >=21
- pybedtools >=0.7
- python ~=3.8
- r-base >=3.4
- r-data.table
- r-dplyr >=0.7
- r-optparse
- r-rlang >=1.0.1
- r-stringr
- r-testthat
- ucsc-gtftogenepred
setup.py
pypi
- biopython *
- numpy *
- pandas *
- pybedtools *
- setuptools *