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GitHub / opencobra / Medusa
Analysis of ensembles of metabolic network reconstructions
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/opencobra%2FMedusa
Stars: 19
Forks: 8
Open Issues: 42
License: mit
Language: Python
Repo Size: 17.2 MB
Dependencies:
181
Created: over 6 years ago
Updated: over 1 year ago
Last pushed: over 1 year ago
Last synced: 13 days ago
Files
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Readme
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Dependencies
- Babel ==2.9.1
- Jinja2 ==2.11.3
- MarkupSafe ==1.1.0
- Pillow ==9.0.0
- PyYAML >=4.2b1
- Pygments ==2.7.4
- Send2Trash ==1.5.0
- Sphinx ==1.8.2
- Unidecode ==1.0.23
- alabaster ==0.7.12
- astroid ==2.1.0
- backcall ==0.1.0
- bleach ==3.3.0
- certifi ==2018.10.15
- chardet ==3.0.4
- cobra ==0.13.4
- cycler ==0.10.0
- decorator ==4.3.0
- depinfo ==1.4.0
- docutils ==0.14
- entrypoints ==0.2.3
- future ==0.17.1
- idna ==2.7
- imagesize ==1.1.0
- ipykernel ==5.1.0
- ipython ==7.1.1
- ipython-genutils ==0.2.0
- ipywidgets ==7.4.2
- jedi ==0.13.1
- jsonschema ==2.6.0
- jupyter ==1.0.0
- jupyter-client ==5.2.3
- jupyter-console ==6.0.0
- jupyter-core ==4.4.0
- jupyterlab ==0.35.4
- jupyterlab-server ==0.2.0
- kiwisolver ==1.0.1
- lazy-object-proxy ==1.3.1
- matplotlib ==3.0.2
- mistune ==0.8.4
- mpmath ==1.0.0
- nbconvert ==5.3.1
- nbformat ==4.4.0
- nbsphinx ==0.3.5
- notebook ==6.4.1
- numpy ==1.15.4
- optlang ==1.4.3
- packaging ==18.0
- pandas ==0.23.4
- pandoc ==1.0.2
- pandocfilters ==1.4.2
- parso ==0.3.1
- pexpect ==4.6.0
- pickleshare ==0.7.5
- pipdeptree ==0.13.1
- pipenv ==2022.1.8
- pkginfo ==1.4.2
- ply ==3.11
- pockets ==0.7.2
- prometheus-client ==0.4.2
- prompt-toolkit ==2.0.7
- ptyprocess ==0.6.0
- pyparsing ==2.3.0
- python-dateutil ==2.7.5
- pytz ==2018.7
- pyzmq ==17.1.2
- qtconsole ==4.4.3
- readme-renderer ==24.0
- requests ==2.20.1
- requests-toolbelt ==0.8.0
- ruamel.yaml ==0.15.77
- scikit-learn ==0.20.1
- scipy ==1.1.0
- six ==1.11.0
- sklearn ==0.0
- snowballstemmer ==1.2.1
- sphinx-autoapi ==0.7.0
- sphinx-rtd-theme ==0.4.2
- sphinxcontrib-dotnetdomain ==0.4
- sphinxcontrib-golangdomain ==0.2.0.dev0
- sphinxcontrib-napoleon ==0.7
- sphinxcontrib-websupport ==1.1.0
- swiglpk ==4.65.0
- sympy ==1.3
- tabulate ==0.8.2
- terminado ==0.8.1
- testpath ==0.4.2
- tornado ==5.1.1
- tqdm ==4.28.1
- traitlets ==4.3.2
- twine ==1.12.1
- typed-ast ==1.3.2
- urllib3 ==1.26.5
- virtualenv ==16.1.0
- virtualenv-clone ==0.4.0
- wcwidth ==0.1.7
- webencodings ==0.5.1
- widgetsnbextension ==3.4.2
- wrapt ==1.11.1
- cobra >=0.13.0
requirements.txt
pypi
- Babel ==2.9.1
- Jinja2 ==2.11.3
- MarkupSafe ==1.1.0
- Pillow ==9.0.0
- Pygments ==2.7.4
- Send2Trash ==1.5.0
- Sphinx ==1.8.2
- alabaster ==0.7.12
- backcall ==0.1.0
- bleach ==3.3.0
- certifi ==2018.10.15
- chardet ==3.0.4
- cobra ==0.13.4
- cycler ==0.10.0
- decorator ==4.3.0
- depinfo ==1.4.0
- docutils ==0.14
- entrypoints ==0.2.3
- future ==0.17.1
- idna ==2.7
- imagesize ==1.1.0
- ipykernel ==5.1.0
- ipython ==7.1.1
- ipython-genutils ==0.2.0
- ipywidgets ==7.4.2
- jedi ==0.13.1
- jsonschema ==2.6.0
- jupyter ==1.0.0
- jupyter-client ==5.2.3
- jupyter-console ==6.0.0
- jupyter-core ==4.4.0
- jupyterlab ==0.35.4
- jupyterlab-server ==0.2.0
- kiwisolver ==1.0.1
- matplotlib ==3.0.2
- mistune ==0.8.4
- mpmath ==1.0.0
- nbconvert ==5.3.1
- nbformat ==4.4.0
- nbsphinx ==0.3.5
- notebook ==6.4.1
- numpy ==1.15.4
- optlang ==1.4.3
- packaging ==18.0
- pandas ==0.23.4
- pandoc ==1.0.2
- pandocfilters ==1.4.2
- parso ==0.3.1
- pexpect ==4.6.0
- pickleshare ==0.7.5
- pipdeptree ==0.13.1
- pipenv ==2022.1.8
- ply ==3.11
- prometheus-client ==0.4.2
- prompt-toolkit ==2.0.7
- ptyprocess ==0.6.0
- pyparsing ==2.3.0
- python-dateutil ==2.7.5
- pytz ==2018.7
- pyzmq ==17.1.2
- qtconsole ==4.4.3
- requests ==2.20.1
- ruamel.yaml ==0.15.77
- six ==1.11.0
- snowballstemmer ==1.2.1
- sphinx-rtd-theme ==0.4.2
- sphinxcontrib-websupport ==1.1.0
- swiglpk ==4.65.0
- sympy ==1.3
- tabulate ==0.8.2
- terminado ==0.8.1
- testpath ==0.4.2
- tornado ==5.1.1
- traitlets ==4.3.2
- urllib3 ==1.26.5
- virtualenv ==16.1.0
- virtualenv-clone ==0.4.0
- wcwidth ==0.1.7
- webencodings ==0.5.1
- widgetsnbextension ==3.4.2