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GitHub / oschwengers / bakta

Rapid & standardized annotation of bacterial genomes, MAGs & plasmids

JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/oschwengers%2Fbakta

Stars: 395
Forks: 42
Open Issues: 19

License: gpl-3.0
Language: Python
Repo Size: 61.3 MB
Dependencies: 31

Created: over 4 years ago
Updated: 21 days ago
Last pushed: 3 months ago
Last synced: 20 days ago

Commit Stats

Commits: 875
Authors: 13
Mean commits per author: 67.31
Development Distribution Score: 0.303
More commit stats: https://commits.ecosyste.ms/hosts/GitHub/repositories/oschwengers/bakta

Topics: annotation, bacteria, bacterial-genomes, bioinformatics, genome-annotation, mag, metagenome-assembled-genomes, microbial-genomics, plasmids

Files
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    Readme
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    Dependencies
    setup.py pypi
    .github/workflows/cd-docker-hub.yml actions
    .github/workflows/cd-pypi.yml actions
    Dockerfile docker
    .github/workflows/ci-lint.yml actions
    .github/workflows/ci-package.yml actions
    .github/workflows/ci-test.yml actions
    environment.yml conda