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GitHub / rickhelmus / patRoon
Workflow solutions for mass-spectrometry based non-target analysis.
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rickhelmus%2FpatRoon
Stars: 54
Forks: 17
Open Issues: 11
License: gpl-3.0
Language: R
Repo Size: 551 MB
Dependencies:
85
Created: about 6 years ago
Updated: 24 days ago
Last pushed: 12 days ago
Last synced: 12 days ago
Topics: mass-spectrometry, non-target, r
Files
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Readme
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Dependencies
DESCRIPTION
cran
- R >= 3.5.0 depends
- Biobase * imports
- BiocParallel * imports
- CAMERA * imports
- DBI * imports
- DT * imports
- MSnbase * imports
- R.utils * imports
- RColorBrewer * imports
- RSQLite >= 2.2.4 imports
- Rcpp * imports
- Rdpack * imports
- UpSetR * imports
- VennDiagram * imports
- backports * imports
- checkmate >= 1.8.5 imports
- circlize * imports
- cluster * imports
- data.table * imports
- dendextend * imports
- digest * imports
- dynamicTreeCut * imports
- enviPat * imports
- fastcluster * imports
- fingerprint * imports
- flexdashboard * imports
- fs * imports
- fst * imports
- future * imports
- future.apply * imports
- glue * imports
- gplots * imports
- graphics * imports
- grid * imports
- heatmaply * imports
- htmlwidgets * imports
- httr * imports
- igraph * imports
- jsonlite * imports
- kableExtra * imports
- keys * imports
- knitr * imports
- magick * imports
- magrittr * imports
- methods * imports
- miniUI * imports
- mzR * imports
- parallel * imports
- processx * imports
- rJava * imports
- rcdk * imports
- rhandsontable * imports
- rmarkdown * imports
- rsm * imports
- rstudioapi * imports
- shiny * imports
- shinyjs * imports
- stats * imports
- tools * imports
- utils * imports
- visNetwork * imports
- withr * imports
- xcms * imports
- yaml * imports
- DiagrammeR * suggests
- DiagrammeRsvg * suggests
- KPIC * suggests
- MetaClean * suggests
- MetaCleanData * suggests
- RAMClustR * suggests
- RDCOMClient * suggests
- covr * suggests
- devtools * suggests
- enviPick * suggests
- metfRag * suggests
- nontarget * suggests
- patRoonData * suggests
- pkgload * suggests
- rlang * suggests
- rsvg * suggests
- splashR * suggests
- testthat * suggests
- vdiffr * suggests
docker/deps/Dockerfile
docker
- rocker/rstudio 4.2 build
docker/rstudio/Dockerfile
docker
- patroonorg/patroondeps latest build