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GitHub / seqan / raptor

A fast and space-efficient pre-filter for querying very large collections of nucleotide sequences.

JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/seqan%2Fraptor

Stars: 47
Forks: 17
Open Issues: 10

License: other
Language: C++
Repo Size: 3.9 MB
Dependencies: 24

Created: over 3 years ago
Updated: 2 months ago
Last pushed: about 1 month ago
Last synced: about 1 month ago

Topics: binning, bloom-filter, filter, k-mer, minimizer, set-membership, threshold

Files

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Readme

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Dependencies

.github/workflows/ci_codeql.yml actions

actions/checkout v3 composite
github/codeql-action/analyze v2 composite
github/codeql-action/autobuild v2 composite
github/codeql-action/init v2 composite

.github/workflows/ci_coverage.yml actions

actions/cache v3 composite
actions/checkout v3 composite
codecov/codecov-action v3 composite

.github/workflows/ci_lint.yml actions

DoozyX/clang-format-lint-action v0.15 composite
PuneetMatharu/cmake-format-lint-action v1.0.1 composite
actions/checkout v3 composite
crazy-max/ghaction-import-gpg v5 composite

.github/workflows/ci_linux.yml actions

actions/cache v3 composite
actions/checkout v3 composite

.github/workflows/ci_macos.yml actions

Homebrew/actions/setup-homebrew master composite
actions/cache v3 composite
actions/checkout v3 composite

.github/workflows/ci_misc.yml actions

actions/cache v3 composite
actions/checkout v3 composite

.github/workflows/ci_sanitizer.yml actions

actions/checkout v3 composite

.github/workflows/ci_utility.yml actions

actions/cache v3 composite
actions/checkout v3 composite

.github/workflows/ci_workflows.yml actions

actions/cache v3 composite
actions/checkout v3 composite
nf-core/setup-nextflow v1 composite