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GitHub / steineggerlab / Metabuli
Metabuli: specific and sensitive metagenomic classification via joint analysis of DNA and amino acid.
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/steineggerlab%2FMetabuli
Stars: 71
Forks: 7
Open Issues: 5
License: gpl-3.0
Language: C++
Repo Size: 16.8 MB
Dependencies:
17
Created: over 3 years ago
Updated: 14 days ago
Last pushed: 14 days ago
Last synced: 14 days ago
Topics: bioinformatics, k-mer, metagenomics, taxonomic-classification, taxonomy
Files
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Readme
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Dependencies
- dataclasses
- networkx 2.6.3.*
- numpy
- pip
- pytest
- pytest-console-scripts
- taxonkit 0.12.0.*
.github/workflows/docker.yml
actions
- actions/checkout v3 composite
- docker/build-push-action ad44023a93711e3deb337508980b4b5e9bcdc5dc composite
- docker/login-action f054a8b539a109f9f41c372932f1ae047eff08c9 composite
- docker/metadata-action 98669ae865ea3cffbcbaa878cf57c20bbf1c6c38 composite
- docker/setup-buildx-action v2 composite
- docker/setup-qemu-action v2 composite
Dockerfile
docker
lib/mmseqs/Dockerfile
docker
- debian stable-slim build
- alpine latest build