Ecosyste.ms: Repos
An open API service providing repository metadata for many open source software ecosystems.
GitHub / tskit-dev / msprime
Simulate genealogical trees and genomic sequence data using population genetic models
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/tskit-dev%2Fmsprime
Stars: 167
Forks: 84
Open Issues: 87
License: gpl-3.0
Language: Python
Repo Size: 14.9 MB
Dependencies:
101
Created: over 9 years ago
Updated: 27 days ago
Last pushed: 28 days ago
Last synced: 27 days ago
Commit Stats
Commits: 3060
Authors: 54
Mean commits per author: 56.67
Development Distribution Score: 0.296
More commit stats: https://commits.ecosyste.ms/hosts/GitHub/repositories/tskit-dev/msprime
Topics: coalescent, genetics, genomics, msprime, python, simulation, trees, tskit
Files
Dependencies
- actions/cache v2 composite
- actions/checkout v2 composite
- actions/setup-python v2 composite
- styfle/cancel-workflow-action 0.6.0 composite
- actions/cache v2 composite
- actions/checkout v2 composite
- actions/setup-python v2 composite
- conda-incubator/setup-miniconda v2 composite
- pre-commit/action v2.0.0 composite
- styfle/cancel-workflow-action 0.6.0 composite
- actions/checkout v2 composite
- actions/download-artifact v2 composite
- actions/setup-python v2 composite
- actions/upload-artifact v2 composite
- pypa/gh-action-pypi-publish master composite
- bintrees ==2.2.0
- codecov ==2.1.12
- daiquiri ==3.0.1
- demes ==0.2.1
- jsonschema <4.0
- kastore ==0.3.2
- mypy ==0.910
- newick ==1.3.2
- numpy ==1.21.4
- pytest ==6.2.5
- pytest-cov ==3.0.0
- pytest-xdist ==2.5.0
- python_jsonschema_objects ==0.4.1
- scipy ==1.7.3
- stdpopsim ==0.1.2
- tskit ==0.5.3
- daiquiri ==3.0.1
- demes ==0.2.1
- demesdraw ==0.2.0
- jupyter-book ==0.13.0
- matplotlib ==3.5.0
- networkx ==2.6.3
- newick ==1.3.1
- sphinx-argparse ==0.3.1
- sphinx-issues ==1.2.0
- tskit ==0.5.3
- tskit-book-theme ==0.3.2
- demes ==0.2.1 test
- gsl * test
- jsonschema <4.0 test
- stdpopsim ==0.1.2 test
- tskit ==0.5.3 test
- bintrees ==2.2.0 test
- daiquiri ==3.0.1 test
- jsonschema <5.0 test
- newick ==1.3.1 test
- numpy ==1.21.4 test
- pytest ==6.2.5 test
- pytest-xdist ==2.4.0 test
- python_jsonschema_objects ==0.4.1 test
- scipy ==1.7.3 test
- tskit ==0.5.3 test
- asv * development
- bintrees * development
- codecov * development
- coverage * development
- daiquiri * development
- demes >=0.2.0 development
- demesdraw * development
- flake8 * development
- jsonschema <4.0 development
- jupyter-book * development
- matplotlib >=3.4.0 development
- meson >=0.61.0 development
- mock * development
- mypy * development
- networkx * development
- newick >=1.3.0 development
- ninja * development
- numpy * development
- pre-commit * development
- pytest * development
- pytest-cov * development
- pytest-xdist * development
- python_jsonschema_objects * development
- scipy * development
- setuptools_scm * development
- sphinx >=4.4 development
- sphinx-argparse * development
- sphinx-issues * development
- stdpopsim >=0.1.2 development
- tskit >=0.5.2 development
- tskit-book-theme * development
- argparse *
- daiquiri *
- dendropy *
- matplotlib *
- numpy *
- pandas *
- pyslim *
- pyvolve *
- scikit-allel *
- scipy ==1.2
- seaborn *
- statsmodels *
- tqdm *