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GitHub / zentnerlab / TSRexploreR
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/zentnerlab%2FTSRexploreR
Stars: 2
Forks: 10
Open Issues: 15
License: other
Language: R
Repo Size: 72.2 MB
Dependencies:
52
Created: over 3 years ago
Updated: over 2 years ago
Last pushed: over 1 year ago
Last synced: about 1 year ago
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Dependencies
DESCRIPTION
cran
- R >= 4.0.0 depends
- BSgenome * imports
- BiocGenerics * imports
- Biostrings * imports
- Cairo * imports
- GenomeInfoDb * imports
- GenomicFeatures * imports
- GenomicRanges * imports
- IRanges * imports
- Rcpp >= 0.11 imports
- Rsamtools * imports
- S4Vectors * imports
- SummarizedExperiment * imports
- assertthat * imports
- circlize * imports
- data.table * imports
- dplyr * imports
- forcats * imports
- ggplot2 * imports
- grid * imports
- magrittr * imports
- methods * imports
- plyranges * imports
- purrr * imports
- rlang * imports
- rtracklayer * imports
- stats * imports
- stringr * imports
- tibble * imports
- tidyr * imports
- tools * imports
- viridis * imports
- BSgenome.Scerevisiae.UCSC.sacCer3 * suggests
- CAGEr * suggests
- ChIPseeker * suggests
- ComplexHeatmap * suggests
- DESeq2 * suggests
- GenomicAlignments * suggests
- Gviz * suggests
- PCAtools * suggests
- TSRchitect * suggests
- TxDb.Scerevisiae.UCSC.sacCer3.sgdGene * suggests
- apeglm * suggests
- clusterProfiler * suggests
- cowplot * suggests
- edgeR * suggests
- ggrastr * suggests
- ggseqlogo * suggests
- knitr * suggests
- org.Sc.sgd.db * suggests
- rmarkdown * suggests
- testthat * suggests