Ecosyste.ms: Repos

An open API service providing repository metadata for many open source software ecosystems.

GitHub topics: allostery

frannerin/AlloViz

A Python package to interactively compute, analyze and visualize protein allosteric communication (residue interaction) networks and delta-networks.

Language: Python - Size: 227 MB - Last synced: 14 days ago - Pushed: 14 days ago - Stars: 4 - Forks: 4

salilab/allosmod-lib

Protocol to model with allostery

Language: Python - Size: 555 KB - Last synced: about 2 months ago - Pushed: 3 months ago - Stars: 4 - Forks: 0

salilab/allosmod

Web service for simulations on a user-provided energy landscape

Language: Perl - Size: 33.9 MB - Last synced: about 2 months ago - Pushed: 7 months ago - Stars: 1 - Forks: 0

eguarnera/AlloLab

AlloLib

Language: Jupyter Notebook - Size: 30 MB - Last synced: 4 months ago - Pushed: about 5 years ago - Stars: 0 - Forks: 0

jgreener64/ProteinEnsembles.jl

Generate and perturb protein structural ensembles using the ExProSE algorithm

Language: Julia - Size: 814 KB - Last synced: 11 days ago - Pushed: 7 months ago - Stars: 22 - Forks: 4

tmcleish/article-optimising-enm

Processed data and scripts for a research article "Optimising Elastic Network Models for Protein Dynamics and Allostery: Spatial and Modal Cut-offs and Backbone Stiffness".

Language: Jupyter Notebook - Size: 104 MB - Last synced: 8 months ago - Pushed: about 2 years ago - Stars: 0 - Forks: 0

pegerto/ASDParser

ASDParser

Language: Python - Size: 99.6 KB - Last synced: 8 days ago - Pushed: 2 months ago - Stars: 1 - Forks: 0

jgreener64/allopred

Predict allosteric pockets on proteins

Language: Python - Size: 206 KB - Last synced: 7 months ago - Pushed: about 2 years ago - Stars: 14 - Forks: 5

RPGroup-PBoC/mwc_mutants

The Energetics of Molecular Adaptation in Transcriptional Regulation

Language: HTML - Size: 645 MB - Last synced: 10 months ago - Pushed: 10 months ago - Stars: 3 - Forks: 1

igorsdub/dynallo-scov2-mpro

Data and code for Computational Analysis of Dynamic Allostery and Control in the SARS-CoV-2 Main Protease

Language: Python - Size: 29.1 MB - Last synced: 7 months ago - Pushed: almost 4 years ago - Stars: 1 - Forks: 0