GitHub topics: cell-signalling
pertzlab/arcos-gui
napari-plugin to analyse collective signalling events
Language: Python - Size: 20.7 MB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 7 - Forks: 1
fberkemeier/Notch-Delta-Coupling
Source code for "Coupling dynamics of 2D Notch-Delta signalling", by Francisco Berkemeier and Karen M. Page
Language: Mathematica - Size: 62.7 MB - Last synced at: 27 days ago - Pushed at: about 2 months ago - Stars: 0 - Forks: 0
karthik-d/maxent-parameter-inference
Maximum Entropy (MaxEnt) parameter inference in biological networks.
Language: MATLAB - Size: 13 MB - Last synced at: 5 months ago - Pushed at: 5 months ago - Stars: 0 - Forks: 0
bioasp/iggy
:arrow_upper_right: Influence graph analysis, consistency check, diagnosis, repair and prediction
Language: Rust - Size: 2.61 MB - Last synced at: 27 days ago - Pushed at: almost 2 years ago - Stars: 7 - Forks: 3
celiaccb/KinasesCommunityDetection
Python pipeline to build empirical kinase networks and identify kinase signalling communities from quantitative phosphoproteomics data.
Language: HTML - Size: 12.8 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 1
meyer-lab/TAMode.jl
An activation model for the full TAM receptor family.
Language: Jupyter Notebook - Size: 2.45 MB - Last synced at: over 1 year ago - Pushed at: about 4 years ago - Stars: 0 - Forks: 0
bioasp/ingranalyze 📦
Influence graph analysis, consistency check, diagnosis, repair and prediction
Language: Python - Size: 84 KB - Last synced at: 27 days ago - Pushed at: over 3 years ago - Stars: 4 - Forks: 0
NTBEL/PARM
PAR2 Activation and calcium signaling Reaction Model in PySB
Language: Python - Size: 188 KB - Last synced at: about 1 month ago - Pushed at: about 2 years ago - Stars: 0 - Forks: 0
GeorgievLab/CeCe
CeCe is a platform for advanced simulation of cells and cell signalling in 2D. It includes a physical engine, stochastic chemical reactions, cell-cell bonding, diffusion, hydrodynamics, and a growth model.
Language: CMake - Size: 5.32 MB - Last synced at: over 1 year ago - Pushed at: almost 7 years ago - Stars: 5 - Forks: 2
majpark21/CODEX
Convolutional Neural Network for Dynamics EXploration (CODEX) is a method for mining time-series dataset by leveraging CNN features.
Language: Jupyter Notebook - Size: 33.1 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 2 - Forks: 2
bioasp/exdesi
Design experiments to differentiate interaction graph models
Language: TeX - Size: 3.97 MB - Last synced at: 26 days ago - Pushed at: over 5 years ago - Stars: 1 - Forks: 0