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GitHub topics: cellprofiler-pipeline

rgomez-AI/CellOrientation

Test of Uniformity for centrosome orientation at early timepoints during Wound Healing Assay

Language: R - Size: 929 KB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 0 - Forks: 0

ajdavies73/H2B_FUCCI2a-Nucleus-Segmentation-and-Cell-Cycle-Analysis

CellProfiler pipeline and ImageJ workflow developed for segmentation of H2B_FUCCI2a_MCF7 cell nuclei for per-nucleus and background fluorescence intensity measurement. Example workflows for downstream cell cycle analysis are also provided in this repository.

Language: R - Size: 22.1 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 1 - Forks: 0

rgomez-AI/3DChromTrans

Measure distances between two types of markers during FISH Assay after Chromosomal Translocation event

Language: Python - Size: 1.04 MB - Last synced at: 8 months ago - Pushed at: 8 months ago - Stars: 0 - Forks: 0

Haricharan0311/Hepatoma-Staging-Project

Scripts and figures as a part of an ongoing research initiative for Advancing Hepatocellular Carcinoma Staging and Prognosis

Language: Jupyter Notebook - Size: 4.59 MB - Last synced at: 10 months ago - Pushed at: 10 months ago - Stars: 0 - Forks: 0

jedrzej-put/biomedical_classification

Language: Jupyter Notebook - Size: 232 KB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 1 - Forks: 0

radee2k/CellProfiler-analysis-of-reproductive-stress-in-HCT116-

ImageJ macros for preparation of single images from stacks with maximum intensity projections and partially automated selection of slices in focus. CellProfiler Pipeline for yH2AX and 53BP1 counting and mitotic cells segmentation in asynchronous cultures. R scripts for processing of CellProfiler output.

Language: R - Size: 43.9 KB - Last synced at: almost 2 years ago - Pushed at: about 4 years ago - Stars: 0 - Forks: 0