rnpnr/ogl_beamforming

Realtime Ultrasound Beamforming with OpenGL

Language: C - Size: 1.02 MB - Last synced at: about 8 hours ago - Pushed at: about 9 hours ago - Stars: 1 - Forks: 4

Dana-Farber-AIOS/pathml

Tools for computational pathology

Language: Python - Size: 218 MB - Last synced at: 1 day ago - Pushed at: 3 days ago - Stars: 429 - Forks: 87

BiaPyX/BiaPy

Open source Python library for building bioimage analysis pipelines

Language: Jupyter Notebook - Size: 1.11 GB - Last synced at: 3 days ago - Pushed at: 3 days ago - Stars: 176 - Forks: 36

seung-lab/microviewer

Multiplatform 3D numpy image browser based viewer with voxel painting.

Language: JavaScript - Size: 2.08 MB - Last synced at: 4 days ago - Pushed at: 4 days ago - Stars: 15 - Forks: 2

seung-lab/connected-components-3d

Connected components on discrete and continuous multilabel 3D & 2D images. Handles 26, 18, and 6 connected variants; periodic boundaries (4, 8, & 6)

Language: C++ - Size: 21.3 MB - Last synced at: 7 days ago - Pushed at: 14 days ago - Stars: 419 - Forks: 47

mlcommons/GaNDLF

A generalizable application framework for segmentation, regression, and classification using PyTorch

Language: Python - Size: 70 MB - Last synced at: 10 days ago - Pushed at: 10 days ago - Stars: 177 - Forks: 87

seung-lab/kimimaro

Skeletonize densely labeled 3D image segmentations with TEASAR. (Medial Axis Transform)

Language: C++ - Size: 13.1 MB - Last synced at: 10 days ago - Pushed at: 10 days ago - Stars: 157 - Forks: 28

ELEKTRONN/elektronn3

A PyTorch-based library for working with 3D and 2D convolutional neural networks, with focus on semantic segmentation of volumetric biomedical image data

Language: Python - Size: 3.1 MB - Last synced at: 8 days ago - Pushed at: over 1 year ago - Stars: 166 - Forks: 29

fangq/mmc

Mesh-based Monte Carlo (MMC)

Language: C - Size: 19.9 MB - Last synced at: 10 minutes ago - Pushed at: 12 days ago - Stars: 41 - Forks: 34

seung-lab/euclidean-distance-transform-3d

Euclidean distance & signed distance transform for multi-label 3D anisotropic images using marching parabolas.

Language: C++ - Size: 6.54 MB - Last synced at: 7 days ago - Pushed at: 4 months ago - Stars: 251 - Forks: 37

Kiemen-Lab/CODAvision

CODAvision - open source medical image labeling tool

Language: Python - Size: 39.3 MB - Last synced at: 13 days ago - Pushed at: 13 days ago - Stars: 11 - Forks: 1

seung-lab/dijkstra3d

Dijkstra's Shortest Path for 6, 18, and 26-Connected 3D (Volumetric) Image Volumes

Language: C++ - Size: 2.53 MB - Last synced at: 12 days ago - Pushed at: 6 months ago - Stars: 81 - Forks: 14

seung-lab/fastremap

Remap, mask, renumber, unique, and in-place transposition of 3D labeled images. Point cloud too.

Language: C++ - Size: 5.95 MB - Last synced at: 16 days ago - Pushed at: 16 days ago - Stars: 56 - Forks: 7

google-research/sofima

Scalable Optical Flow-based Image Montaging and Alignment

Language: Jupyter Notebook - Size: 4.73 MB - Last synced at: 12 days ago - Pushed at: 5 months ago - Stars: 78 - Forks: 17

seung-lab/zmesh

Marching Cubes & Mesh Simplification on multi-label 3D images.

Language: C++ - Size: 621 MB - Last synced at: 7 days ago - Pushed at: 21 days ago - Stars: 63 - Forks: 8

seung-lab/cloud-volume

Read and write Neuroglancer datasets programmatically.

Language: Python - Size: 65.8 MB - Last synced at: 26 days ago - Pushed at: 26 days ago - Stars: 153 - Forks: 52

anjanatiha/Pneumonia-Detection-from-Chest-X-Ray-Images-with-Deep-Learning

Detecting Pneumonia in Chest X-ray Images using Convolutional Neural Network and Pretrained Models

Language: Jupyter Notebook - Size: 28 MB - Last synced at: 26 days ago - Pushed at: over 6 years ago - Stars: 166 - Forks: 79

ciroraggio/AugmentedDataLoader

Medical image augmentation tool that can be integrated with Pytorch & MONAI.

Language: Python - Size: 4.24 MB - Last synced at: 3 days ago - Pushed at: about 1 month ago - Stars: 2 - Forks: 0

kyegomez/SimpleUnet

An simple implementation of Unet because all the implementations i've seen are wayy tooo complicated.

Language: Python - Size: 205 KB - Last synced at: 29 days ago - Pushed at: 8 months ago - Stars: 9 - Forks: 1

fpaskali/neck-swe-classification

Python workflow for supervised classification of shear wave elastography images from neck area.

Language: Python - Size: 5.03 MB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 0 - Forks: 0

zudi-lin/pytorch_connectomics

PyTorch Connectomics: segmentation toolbox for EM connectomics

Language: Python - Size: 91.1 MB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 182 - Forks: 78

premDelaprem/MRI-tumor-classification

Building CNN models to detect and classify brain tumors using images of MRI scans

Language: Jupyter Notebook - Size: 26.4 MB - Last synced at: about 2 months ago - Pushed at: about 2 months ago - Stars: 1 - Forks: 0

cviaai/BIA-course

A course in biomedical image analytics by Prof. Dmitry V. Dylov

Language: Jupyter Notebook - Size: 29.7 MB - Last synced at: about 2 months ago - Pushed at: about 2 months ago - Stars: 19 - Forks: 2

cambridgeltl/visual-med-alpaca

Visual Med-Alpaca is an open-source, multi-modal foundation model designed specifically for the biomedical domain, built on the LLaMa-7B.

Language: Python - Size: 32.9 MB - Last synced at: about 2 months ago - Pushed at: over 1 year ago - Stars: 385 - Forks: 42

marekkoc/project-archive

A comprehensive collection of my programming projects, research work, and technical experiments. This repository showcases my experience in data science, image processing, 2D/3D visualization, and GUI application development. Projects are organized by domain and technology stack for easy navigation.

Size: 7.81 KB - Last synced at: about 2 months ago - Pushed at: about 2 months ago - Stars: 0 - Forks: 0

jvwilliams23/pyssam

A Python library for biomedical statistical shape and appearance modelling.

Language: Python - Size: 28.4 MB - Last synced at: 7 days ago - Pushed at: about 1 year ago - Stars: 34 - Forks: 3

Translational-Biophotonics-Laboratory/mdspacer

Multi-dimensional (2D & 3D) Ripley's K for Biomedical Applications

Language: Jupyter Notebook - Size: 189 MB - Last synced at: 2 months ago - Pushed at: 2 months ago - Stars: 0 - Forks: 0

Phonkerxcc/Skin-Lesion-Detection

Skin Lesion Detection Using Convolutional Neural Network

Language: Jupyter Notebook - Size: 181 KB - Last synced at: 2 months ago - Pushed at: 2 months ago - Stars: 0 - Forks: 0

aangelopoulos/im2im-uq

Image-to-image regression with uncertainty quantification in PyTorch. Take any dataset and train a model to regress images to images with rigorous, distribution-free uncertainty quantification.

Language: Python - Size: 5.24 MB - Last synced at: 5 days ago - Pushed at: over 2 years ago - Stars: 56 - Forks: 10

halleewong/MultiverSeg

MultiverSeg: Scalable Interactive Segmentation of Biomedical Imaging Datasets with In-Context Guidance

Language: Jupyter Notebook - Size: 1.8 MB - Last synced at: 2 months ago - Pushed at: 2 months ago - Stars: 12 - Forks: 2

jananour00/FitnessX_App_Flutter_learning_phase

Learning Phase

Language: Dart - Size: 7.01 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 0 - Forks: 0

seung-lab/tinybrain

Image pyramid generation for grayscale and segmentation image resize.

Language: Python - Size: 1.11 MB - Last synced at: 7 days ago - Pushed at: 3 months ago - Stars: 9 - Forks: 0

OpenEIT/OpenEIT

Python based dashboard for real-time Electrical Impedance Tomography including image reconstruction using Back Projection, Graz Consensus and Gauss Newton methods

Language: Python - Size: 188 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 230 - Forks: 72

junlabucsd/napari-mm3

Mother machine image analysis through napari

Language: Jupyter Notebook - Size: 20.1 MB - Last synced at: 29 days ago - Pushed at: 5 months ago - Stars: 10 - Forks: 4

Manvith-Prabhu/Capsule_vision_2024

CASCRNet is proposed as a compact and novel model for capsule endoscopy disease classification.

Language: Jupyter Notebook - Size: 94.5 MB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 0 - Forks: 0

BinKeinSweater/kimi

The minimalistic Kimi theme updates the Explorer interface with colored buttons, a fancy navigation area, and disk full indicators.

Size: 1.95 KB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 0 - Forks: 0

Alliance-RDM-GDR/RDM_BioimageFAIR

[EN] This repository contains a presentation for sharing biomedical images and reproducible workflows into generalist repositories like FRDR. [FR] Ce dépôt contient une présentation pour le partage d'images biomédicales et de flux de travail reproductibles dans des dépôts généralistes comme DFDR.

Language: HTML - Size: 14.9 MB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 0 - Forks: 0

amrzhd/MRISkullStripping

Developing a UNet3D model for accurate MRI skull stripping using the Calgary Campinas 359 dataset, enhancing neuroimaging preprocessing workflows.

Language: Jupyter Notebook - Size: 60.5 KB - Last synced at: about 2 months ago - Pushed at: 8 months ago - Stars: 94 - Forks: 2

SohelRana-aiub-Pro/Biomedical-Engineering-Research-Projects

Artificial intelligence (AI) is gradually changing medical practice. With recent progress in digitized data acquisition, machine learning and computing infrastructure, AI applications are expanding into areas that were previously thought to be only the province of human experts.

Size: 24.4 KB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 1 - Forks: 0

anjanatiha/Cancer-Detection-from-Microscopic-Tissue-Images-with-Deep-Learning

Cancer Detection from Microscopic Images by Fine-tuning Pre-trained Models ("Inception") for new class labels

Language: Jupyter Notebook - Size: 27 MB - Last synced at: 26 days ago - Pushed at: about 5 years ago - Stars: 30 - Forks: 10

sauravmishra1710/UNet-Plus-Plus---Brain-Tumor-Segmentation

Brain tumor segmentation using UNet++ Architecture . Implementation of the paper titled - UNet++: A Nested U-Net Architecture for Medical Image Segmentation @ https://arxiv.org/abs/1807.10165

Language: Jupyter Notebook - Size: 36.6 MB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 15 - Forks: 1

luisvalesilva/wsipre

Handling whole-slide images with region-level annotations.

Language: Jupyter Notebook - Size: 7.55 MB - Last synced at: 5 days ago - Pushed at: over 6 years ago - Stars: 10 - Forks: 5

RuiyangJu/Bone_Fracture_Detection_YOLOv8

Scientific Reports 2023

Language: Python - Size: 7.07 MB - Last synced at: 5 months ago - Pushed at: 5 months ago - Stars: 43 - Forks: 8

RuiyangJu/YOLOv8_Global_Context_Fracture_Detection

ISPACS 2024

Language: Python - Size: 4.76 MB - Last synced at: 5 months ago - Pushed at: 5 months ago - Stars: 4 - Forks: 1

kaledhoshme123/kaledhoshme123

Size: 46.9 KB - Last synced at: 5 months ago - Pushed at: 5 months ago - Stars: 0 - Forks: 0

reshalfahsi/MSGNet

Modified MobileNet-ShuffleNet-GhostNet Network for Lightweight Retinal Vessel Segmentation

Language: Python - Size: 454 KB - Last synced at: about 2 months ago - Pushed at: over 1 year ago - Stars: 3 - Forks: 0

anjanatiha/Malaria-Parasite-Detection-in-Thin-Blood-Smear-Images-with-Convolutional-Neural-Networks

Malaria Detection from Cell Images using Deep Learning - NasNetMobile Model

Language: Jupyter Notebook - Size: 365 KB - Last synced at: 26 days ago - Pushed at: about 5 years ago - Stars: 3 - Forks: 3

amatov/CurvedSpeckleKymograph

Language: MATLAB - Size: 143 KB - Last synced at: 6 months ago - Pushed at: 6 months ago - Stars: 0 - Forks: 0

Amirhosein2c/MIP-DDPM

How To Segment in 3D Using 2D Models: Automated 3D Segmentation of Prostate Cancer Metastatic Lesions on PET Volumes Using Multi-Angle Maximum Intensity Projections and Diffusion Models

Language: Jupyter Notebook - Size: 3.28 MB - Last synced at: 3 months ago - Pushed at: 7 months ago - Stars: 2 - Forks: 0

TylerAdamMartinez/Body-Signals-Filtering

BMEN 3311 (Biomedical Signal Analysis): Reads in biomedical data from a patient’s files into a script and plots the data. Then take the discrete Fourier transforms of each signal then plot the frequency Spectrums. In addition, create a digital notch filter to remove the noise coming from mains power in the ECG signal without creating a phase shift due to filtering (zero-phase filtering), determine if the patient was tired during the recording of the EMG signal based on the frequency spectrum of the EMG signal, and determine the mental state of the patient during the recording of the EEG signal based on the frequency spectrum of the EEG signal. Finally, break down how much of the EEG signal is comprised of the four EEG wave components (Delta, Theta, Alpha and Beta), and display it in a bar graph.

Language: MATLAB - Size: 1.15 MB - Last synced at: 3 months ago - Pushed at: over 3 years ago - Stars: 7 - Forks: 2

JiangYi0311/Mito-SegEM

A mitochondrial analysis tool for the vEM dataset.

Language: Python - Size: 6.17 MB - Last synced at: 6 months ago - Pushed at: 6 months ago - Stars: 0 - Forks: 0

sondosaabed/Biomedical-Image-Analysis-in-Python

gaining essential skills for tasks like cardiac MRI segmentation and detecting Alzheimer's-related brain structure changes.

Language: Jupyter Notebook - Size: 10.2 MB - Last synced at: 20 days ago - Pushed at: over 1 year ago - Stars: 14 - Forks: 0

das-boot65/Brain-tumor-segmentation-and-segmentation

MATLAB-based automated system leveraging advanced image processing, segmentation techniques (e.g., K-means, Fuzzy C-means), and deep learning models (ResNet-50, Inception v3) to enhance accuracy in brain tumor diagnosis.

Size: 0 Bytes - Last synced at: 8 months ago - Pushed at: 8 months ago - Stars: 0 - Forks: 0

SajjadHm/Fetal-Head-Segmentation

Fetal Head Segmentation in Ultrasound Images via Deep Learning and Classical Methods

Language: Jupyter Notebook - Size: 6.03 MB - Last synced at: 9 months ago - Pushed at: 11 months ago - Stars: 0 - Forks: 0

moshiurtonmoy/X-Brain

X-Brain: Explainable Automated Recognition of Brain Tumors using Robust Deep Attention CNN

Language: Jupyter Notebook - Size: 24.5 MB - Last synced at: 9 months ago - Pushed at: 9 months ago - Stars: 0 - Forks: 0

JiaxinZhuang/Skin-Lesion-Recognition.Pytorch

Rank3 Code for ISIC 2018: Skin Lesion Analysis Towards Melanoma Detection, Task 3

Language: Python - Size: 809 KB - Last synced at: 7 months ago - Pushed at: almost 5 years ago - Stars: 46 - Forks: 9

sondosaabed/DataCamp-Image-Processing-Track

This track covers the fundamentals, from image pre-processing to deep learning. Began with image enhancement, restoration, biomedical images to convolutional neural nets, build powerful deep learning image classifiers.

Size: 2.93 KB - Last synced at: 3 months ago - Pushed at: over 1 year ago - Stars: 8 - Forks: 0

thierleft/coregistration-longitudinal-pai-mesoscopy

3D mesoscopic photoacoustic image co-registration

Language: Python - Size: 928 KB - Last synced at: 10 months ago - Pushed at: 10 months ago - Stars: 0 - Forks: 0

emogooo/Biomedical-Data-Processing-with-Image-Filters

Processing biomedical data using LBP, HOG, and Gabor filters for enhanced analysis and feature extraction.

Language: Python - Size: 17.9 MB - Last synced at: 4 months ago - Pushed at: about 1 year ago - Stars: 2 - Forks: 0

SzymonMs/Denoising_OCT

Master University Project

Language: MATLAB - Size: 308 MB - Last synced at: 11 months ago - Pushed at: 11 months ago - Stars: 0 - Forks: 0

amarrammadhu/Biomedical-Engineering-

My assignments and projects concerned with Biomedical Engineering

Language: TeX - Size: 5.26 MB - Last synced at: 11 months ago - Pushed at: 11 months ago - Stars: 2 - Forks: 0

ekagra-ranjan/Blood-Smear-Analyzer

Code and demo result of Blood Smear Analyzer

Language: Jupyter Notebook - Size: 6.48 MB - Last synced at: 12 months ago - Pushed at: about 6 years ago - Stars: 1 - Forks: 1

kalyanksk/lungs_segmentation

Lung segmentation in chest X-ray images using U-Net

Language: Python - Size: 110 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0

pathak-ashutosh/liver-segmentation

Segment liver using unet architecture. This was a project I did for a senior anonymously as his final year project during my undergrad.

Language: Jupyter Notebook - Size: 45.9 MB - Last synced at: 5 months ago - Pushed at: about 1 year ago - Stars: 1 - Forks: 0

shankarchawla1776/u-net-for-skin-cancer-detection

U-Net Implementation for Skin Cancer Detection

Language: Python - Size: 39.6 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0

ThetaKimbi/Biomedical-Computer-Vision-Project

Biomedical Computer Vision Project | Academic Year 2023-2024 | Politecnico di Milano

Language: Jupyter Notebook - Size: 784 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0

MajaJuri/Alzheimer-Detection

Projekt u sklopu predmeta Analiza slika u biomedicini

Language: Jupyter Notebook - Size: 428 MB - Last synced at: 3 months ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0

IQTLabs/BioNIC 📦

optimizing deep learning for ultra-small biomedical datasets

Language: Jupyter Notebook - Size: 3.83 MB - Last synced at: about 1 year ago - Pushed at: over 4 years ago - Stars: 5 - Forks: 1

Ohara124c41/AIPM-Xray_Images-AutoML

AI for Product Managers Nanodegree Alpha/Beta - Classifying x-ray images from a dataset using AutoML

Size: 2 MB - Last synced at: about 1 year ago - Pushed at: about 6 years ago - Stars: 1 - Forks: 0

PrasunDatta/RSNA-STR-Pulmonary-Embolism-Detection_EDA

In this work, chest CT scan data launched by RSNA STR has been explored and analyzed extensively. This data was released mainly for the purpose of detecting pulmonary embolism.

Language: Jupyter Notebook - Size: 2.29 MB - Last synced at: about 1 year ago - Pushed at: over 2 years ago - Stars: 0 - Forks: 0

PrasunDatta/APTOS-2019-Blindness-Detection

In this work, we will detect diabetic retinopathy from retina images. To accomplish that, we will, at first, explore the retina images thoroughly.

Language: Jupyter Notebook - Size: 2.29 MB - Last synced at: about 1 year ago - Pushed at: over 2 years ago - Stars: 0 - Forks: 0

JJSanabriaS/2019_dicom_3d_-sample-

gui suite for biomedic profesional (dentist) coded on python

Language: Python - Size: 7.96 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0

JackWBoynton/mri_segmentation_cnn

FCN model and utils for automating the segmentation of knee structures from MR images

Language: Python - Size: 6.84 KB - Last synced at: about 1 year ago - Pushed at: about 5 years ago - Stars: 0 - Forks: 0

gabrielziegler3/CoDePPI

Context-dependent Probabilistic Prior Information for Improved Compressed Sensing MRI Reconstruction

Language: Python - Size: 127 MB - Last synced at: over 1 year ago - Pushed at: almost 4 years ago - Stars: 6 - Forks: 1

FilippoCastellani/CaVe

Biomedical Signal Processing & Medical Images - projects realized by a team of students from Politecnico di Milano.

Language: MATLAB - Size: 256 MB - Last synced at: about 1 year ago - Pushed at: over 1 year ago - Stars: 2 - Forks: 0

mida-project/meta Fork of MIMBCD-UI/meta

:paperclip: About MIDA Project

Size: 143 MB - Last synced at: about 1 year ago - Pushed at: over 4 years ago - Stars: 12 - Forks: 1

Gaurav0502/retina-multilabel-classification

Retina Disease Detection using Ensemble methods for Multilabel Classification

Language: Jupyter Notebook - Size: 10.7 MB - Last synced at: 3 months ago - Pushed at: over 2 years ago - Stars: 2 - Forks: 0

souheib1/Refinement-of-DL-approaches-for-unsupervised-cell-segmentation-classification-on-microfluidic-images

Research internship 2023 at Telecom Paris

Language: Jupyter Notebook - Size: 915 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 6 - Forks: 0

fitushar/Quantification-of-Trabeculae-Inside-the-Heart-from-MRI-Using-Fractal-Analysis

In this project, we demonstrate the fractal dimension (FD) and manual segmentation of the Magnetic Resonance Imaging (MRI) of the heart that quantify amount of trabeculae inside the heart.

Language: MATLAB - Size: 20.5 MB - Last synced at: 5 months ago - Pushed at: over 6 years ago - Stars: 4 - Forks: 0

Anivader/Worm-micropillar-dislocation

An automated method for estimating micropillar dislocation induced by C. Elegans worms using bright-field videos & image processing

Language: Python - Size: 8.42 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0

Borda/pyBPDL

Binary Pattern Dictionary Learning for gene activation in microscopy images

Language: Python - Size: 9.97 MB - Last synced at: 2 months ago - Pushed at: over 3 years ago - Stars: 8 - Forks: 1

AdrianBZG/Muscular-Dystrophy-Diagnosis

Code for "A Convolutional Neural Network for the automatic diagnosis of collagen VI-related muscular dystrophies" (Applied Soft Computing, 2019)

Language: Python - Size: 35.6 MB - Last synced at: 3 months ago - Pushed at: over 5 years ago - Stars: 5 - Forks: 1

jedrzej-put/biomedical_classification

Language: Jupyter Notebook - Size: 232 KB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 1 - Forks: 0

zaaachos/Thesis-Diagnostic-Captioning

BSc Thesis research on Medical Image Captioning [ or Diagnostic Captioning (DC) ]

Language: Python - Size: 69.3 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 3 - Forks: 0

MTank76/Biomedical-Image-Analytics.

This repository hosts a hobby project centered around biomedical image analysis, created while learning Python and utilizing Jupyter Notebooks. The project aims to explore the world of medical imaging, understand image processing techniques, and extract valuable insights from biomedical images.

Language: Jupyter Notebook - Size: 420 KB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0

Mina-Moeini/BioMedical-Segmentation

Language: Jupyter Notebook - Size: 2.55 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0

Sebas312431/Funbio-GRUPO-4-

Repositorio utilizado para documentar proyecto del curso "Fundamentos de Biodiseño" Grupo 4

Language: Jupyter Notebook - Size: 1.33 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 1

mendes-davi/biomedical-signal-processing

A collection of mostly MATLAB scripts for Biomedical Signal Processing used and developed for the "Biological Signal Processing" lectures at UnB (Universidade de Brasília, Brazil)

Language: MATLAB - Size: 47.5 MB - Last synced at: over 1 year ago - Pushed at: over 4 years ago - Stars: 2 - Forks: 0

bertpt/u-net

Segmentation of Biomedical Images is based on U-Net. This U-Net implementation using Keras and TensorFlow has varying depth that can be specified by model input.

Language: Python - Size: 453 KB - Last synced at: over 1 year ago - Pushed at: about 6 years ago - Stars: 1 - Forks: 2

sauravmishra1710/Malaria-Detection-Using-Deep-Learning-Techniques

Malaria Parasite Detection using Efficient Neural Ensembles. Malaria, a life threatening disease caused by the bite of the Anopheles mosquito infected with the parasite, has been a major burden towards healthcare for years leading to approximately 400,000 deaths globally every year. This study aims to build an efficient system by applying ensemble techniques based on deep learning to automate the detection of the parasite using whole slide images of thin blood smears.

Language: Jupyter Notebook - Size: 295 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 9 - Forks: 5

jvanvugt/pytorch-unet

Tunable U-Net implementation in PyTorch

Language: Python - Size: 16.6 KB - Last synced at: over 1 year ago - Pushed at: about 5 years ago - Stars: 294 - Forks: 92

MarioPasc/Biomedical_images_first_assignment

This repository contains all the code I've written for the first assignment of the course 'Biomedical Images'

Language: Jupyter Notebook - Size: 10.6 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 2 - Forks: 0

reshalfahsi/contrastive-ssl-pathology

Self-Supervised Contrastive Learning for Colon Pathology Classification

Language: Jupyter Notebook - Size: 1.07 MB - Last synced at: about 2 months ago - Pushed at: over 1 year ago - Stars: 1 - Forks: 0

Utkarsha-Shukla/My_Projects

Welcome to my repository! It contains my progress and projects, application of Data Science in the field of Healthcare.

Size: 12.7 KB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0

nicholasbook/slicevis

A python package for interactive visualization of volumetric slices.

Language: Python - Size: 40.8 MB - Last synced at: over 1 year ago - Pushed at: over 2 years ago - Stars: 1 - Forks: 0

awcasella/Imagens-Biomedicas-UNIFESP-SJC-EngBio

This repository contains all the image processing algorithms studied in discipline "Imagens Biomédicas" of Biomedical Engineering course at UNIFESP in the first semester of 2017. All the algorithms are written in both MatLab and Python Languages.

Language: MATLAB - Size: 1.68 MB - Last synced at: over 1 year ago - Pushed at: over 5 years ago - Stars: 3 - Forks: 1

awcasella/Template-TCC-LaTeX-UNIFESP-SJC-EngBio

Template LaTeX de TCC Engenharia Biomédica da UNIFESP-SJC.

Language: TeX - Size: 637 KB - Last synced at: over 1 year ago - Pushed at: over 5 years ago - Stars: 1 - Forks: 0

awcasella/Calculo-Numerico-UNIFESP-SJC-EngBio

This repository contains all the algorithms studied in discipline "Calculo Numerico" of Biomedical Engineering course at UNIFESP in the second semester of 2018.

Language: MATLAB - Size: 22.5 KB - Last synced at: over 1 year ago - Pushed at: over 5 years ago - Stars: 3 - Forks: 1

awcasella/Engenharia-Medica-Aplicada-UNIFESP-SJC-EngBio

This repository contains all the machine learning algorithms studied in discipline "Engenharia Médica Aplicada" of Biomedical Engineering course at UNIFESP in the second semester of 2018. All the algorithms are written in both MatLab and Python Languages.

Language: MATLAB - Size: 102 KB - Last synced at: over 1 year ago - Pushed at: over 5 years ago - Stars: 2 - Forks: 2

mirzaevinom/promise12_segmentation

Codes that I have written to complete promise12 prostate segmentation competition.

Language: Python - Size: 452 KB - Last synced at: over 1 year ago - Pushed at: over 7 years ago - Stars: 94 - Forks: 44