GitHub topics: genome-sequence-analysis
bitlab-tech/sequence_analysis_security-study
Security & performance assessment on client-server schemes that perform genomic sequence analysis using different encryption methods
Language: Rust - Size: 258 KB - Last synced at: about 2 months ago - Pushed at: about 2 months ago - Stars: 0 - Forks: 0
CMU-SAFARI/GenASM
Source code for the software implementations of the GenASM algorithms proposed in our MICRO 2020 paper: Senol Cali et. al., "GenASM: A High-Performance, Low-Power Approximate String Matching Acceleration Framework for Genome Sequence Analysis" at https://people.inf.ethz.ch/omutlu/pub/GenASM-approximate-string-matching-framework-for-genome-analysis_micro20.pdf
Language: C - Size: 44.9 KB - Last synced at: about 1 year ago - Pushed at: over 2 years ago - Stars: 29 - Forks: 7
n-shenoy/identify-poor-quality-sequencing-cycles-and-bases
Python bioinformatics project to detect poor quality sequencing cycles and deduce the identity of identified bases.
Language: Jupyter Notebook - Size: 42 KB - Last synced at: almost 2 years ago - Pushed at: about 3 years ago - Stars: 0 - Forks: 0
TomMakesThings/Genome-Sequence-Analysis-HMM
HMM for annotating coding regions of DNA in S. cerevisiae chromosome III
Language: Jupyter Notebook - Size: 1.32 MB - Last synced at: over 2 years ago - Pushed at: over 2 years ago - Stars: 2 - Forks: 0
