GitHub topics: iq-tree
PopovIILab/PhoBl
🦇🦠🌳Study on detection of Brno loanvirus in Southern Russia
Language: Jupyter Notebook - Size: 8.26 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 0 - Forks: 0
iliapopov17/PhoBl
Repository for supplementary materials for study on detection of Brno loanvirus in Southern Russia
Language: Jupyter Notebook - Size: 2.44 MB - Last synced at: 12 months ago - Pushed at: 12 months ago - Stars: 0 - Forks: 0
Cibiv/IQ-TREE 📦
Efficient phylogenomic software by maximum likelihood
Language: C++ - Size: 65.4 MB - Last synced at: about 1 year ago - Pushed at: over 3 years ago - Stars: 180 - Forks: 45
Mapleia/BIOL417
Phylogeny related tools packaged into Dockerized containers.
Language: PowerShell - Size: 38.1 KB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0
juliawiggeshoff/astral-species-tree
This is a Snakemake workflow that calculates maximum-likelihood gene trees with IQ-TREE and 100 bootstrap replicates for each tree. Then, consensus trees are produced and combined to infer a species tree following the multispecies coalescent model with ASTRAL. Imported from my GitLab.
Language: Python - Size: 14.6 KB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0
juliawiggeshoff/supermatrix-tree
Snakemake workflow that concatenate MSA files into a supermatrix and calculates a maximum likelihood tree. Imported from my GitLab
Language: Python - Size: 3.62 MB - Last synced at: over 1 year ago - Pushed at: about 2 years ago - Stars: 0 - Forks: 0
joshlvmh/iqtree_arm_neon
IQ-TREE ported to work for systems with ARM NEON ISA
Language: C++ - Size: 7.59 MB - Last synced at: about 2 years ago - Pushed at: over 4 years ago - Stars: 2 - Forks: 1
sennettm/Column_Cross_Validation_LOCO_XV
A new model-selection criteria for phylogenetics to calculate the predictive log-likelihood score.
Language: Python - Size: 19.5 KB - Last synced at: almost 2 years ago - Pushed at: over 2 years ago - Stars: 0 - Forks: 0
reslp/iqtreeGUI
iqtreeGUI - A graphical user interface for IQ-TREE
Language: Python - Size: 118 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 3 - Forks: 5
btmartin721/ddrad_scripts
Random scripts for dealing with ddRAD data, including output from pyRAD
Language: Python - Size: 18.6 KB - Last synced at: about 2 years ago - Pushed at: over 4 years ago - Stars: 1 - Forks: 1
