GitHub topics: itk-module
InsightSoftwareConsortium/ITK-Wasm
High performance spatial analysis in a web browser and across programming languages and hardware architectures
Language: Python - Size: 246 MB - Last synced at: 1 day ago - Pushed at: 1 day ago - Stars: 217 - Forks: 55
InsightSoftwareConsortium/ITKElastix
An ITK Python interface to elastix, a toolbox for rigid and nonrigid registration of images
Language: Python - Size: 137 MB - Last synced at: 8 days ago - Pushed at: 8 days ago - Stars: 242 - Forks: 26
SCIInstitute/ITKCleaver
Wrapper for Cleaver to use as an ITK filter
Language: C++ - Size: 584 KB - Last synced at: 16 days ago - Pushed at: 16 days ago - Stars: 4 - Forks: 6
InsightSoftwareConsortium/ITKGrowCut
ITKGrowCut is a remote module for ITK. It segments a 3D image from user-provided foreground and background seeds.
Language: C++ - Size: 99.6 KB - Last synced at: 9 days ago - Pushed at: 5 months ago - Stars: 15 - Forks: 9
KitwareMedical/ITKUltrasound
ITK module with classes particularly useful for ultrasound.
Language: C++ - Size: 24 MB - Last synced at: 1 day ago - Pushed at: 4 months ago - Stars: 54 - Forks: 23
KitwareMedical/ITKDICOM
Better support for DICOM in ITK.
Language: C++ - Size: 113 KB - Last synced at: 1 day ago - Pushed at: 26 days ago - Stars: 5 - Forks: 3
InsightSoftwareConsortium/ITKVtkGlue
This module contains classes that bridge ITK image processing and VTK visualization pipelines.
Language: C++ - Size: 216 KB - Last synced at: 9 days ago - Pushed at: about 1 month ago - Stars: 16 - Forks: 8
InsightSoftwareConsortium/ITKRobustPredicate
A wrapper around Jonathan Shewchuk's Robust Predicate code. http://www.cs.cmu.edu/~quake/robust.html
Language: C - Size: 39.1 KB - Last synced at: 9 days ago - Pushed at: about 1 month ago - Stars: 1 - Forks: 2
InsightSoftwareConsortium/ITKIOScanco
ITK Image IO for Scanco MicroCT .ISQ files
Language: C++ - Size: 4.63 MB - Last synced at: 28 days ago - Pushed at: about 1 month ago - Stars: 13 - Forks: 15
InsightSoftwareConsortium/ITKMinimalPathExtraction
Vessel and tube centerline extraction
Language: C++ - Size: 2.92 MB - Last synced at: 8 days ago - Pushed at: 4 months ago - Stars: 33 - Forks: 23
KitwareMedical/ITKContourInterpolation
An implementation of morphological contour interpolation
Language: C++ - Size: 3.33 MB - Last synced at: 1 day ago - Pushed at: about 1 month ago - Stars: 33 - Forks: 14
InsightSoftwareConsortium/ITKSplitComponents
This ITK module contains a filter that generates component images from an itk::Image of itk::Vector, itk::CovariantVector, or itk::SymmetricSecondRankTensor.
Language: TeX - Size: 3.42 MB - Last synced at: 8 days ago - Pushed at: about 1 month ago - Stars: 5 - Forks: 6
InsightSoftwareConsortium/ITKIOMeshSWC
ITK module for reading meshes from SWC files, a human- and machine-readable format for representing neuron morphologies
Language: C++ - Size: 75.2 KB - Last synced at: 9 days ago - Pushed at: 5 months ago - Stars: 2 - Forks: 2
InsightSoftwareConsortium/ITKIsotropicWavelets
External Module for ITK, implementing Isotropic Wavelets and Riesz Filter for multiscale phase analysis.
Language: C++ - Size: 1.94 MB - Last synced at: 8 days ago - Pushed at: about 2 months ago - Stars: 14 - Forks: 11
InsightSoftwareConsortium/LesionSizingToolkit
A module for the Insight Toolkit (ITK) that provides a generic, modular, and extensible architecture for lesion sizing algorithms in medical images as well as a reference algorithm for lung solid lesion segmentation in CT images.
Language: C++ - Size: 3.97 MB - Last synced at: 9 days ago - Pushed at: about 2 months ago - Stars: 10 - Forks: 13
InsightSoftwareConsortium/ITKPerformanceBenchmarking
Real-world tests to benchmark ITK performance.
Language: C++ - Size: 3.31 MB - Last synced at: 8 days ago - Pushed at: 2 months ago - Stars: 2 - Forks: 8
InsightSoftwareConsortium/ITKBSplineGradient
Approximate an image's gradient from a b-spline fit to its intensity
Language: C++ - Size: 147 KB - Last synced at: 8 days ago - Pushed at: 2 months ago - Stars: 2 - Forks: 5
InsightSoftwareConsortium/ITKVkFFTBackend
VkFFT backends for ITK FFT classes.
Language: Jupyter Notebook - Size: 1.47 MB - Last synced at: 8 days ago - Pushed at: about 1 month ago - Stars: 8 - Forks: 6
InsightSoftwareConsortium/ITKFPFH
Fast Point Feature Histogram
Language: C++ - Size: 86.9 KB - Last synced at: 9 days ago - Pushed at: about 1 month ago - Stars: 4 - Forks: 1
InsightSoftwareConsortium/ITKColorNormalization
Structure preserving color normalization on H&E images using a reference image
Language: C++ - Size: 153 KB - Last synced at: 9 days ago - Pushed at: 6 months ago - Stars: 21 - Forks: 5
InsightSoftwareConsortium/ITKThickness3D
An ITK module to compute 3D thickness
Language: C++ - Size: 116 KB - Last synced at: 9 days ago - Pushed at: 3 months ago - Stars: 42 - Forks: 19
InsightSoftwareConsortium/ITKTextureFeatures
Fast, Texture Feature Maps from N-Dimensional Images
Language: C++ - Size: 1.17 MB - Last synced at: 6 days ago - Pushed at: 4 months ago - Stars: 23 - Forks: 16
InsightSoftwareConsortium/ITKGenericLabelInterpolator Fork of fbudin69500/ITKGenericLabelInterpolator
The basic idea of this generic interpolator for label images is to interpolate each label with an ordinary image interpolator, and return the label with the highest value. This is the idea used by the itk::LabelImageGaussianInterpolateImageFunction interpolator. Unfortunately, this class is currently limited to Gaussian interpolation. Using generic programming, our proposed interpolator extends this idea to any image interpolator. Combined with linear interpolation, this results in similar or better accuracy and much improved computation speeds on a test image.
Language: C++ - Size: 765 KB - Last synced at: 9 days ago - Pushed at: 3 months ago - Stars: 4 - Forks: 6
InsightSoftwareConsortium/ITKLabelErodeDilate Fork of richardbeare/LabelErodeDilate
Erode and dilate operations on label images
Language: C++ - Size: 1.83 MB - Last synced at: 9 days ago - Pushed at: 3 months ago - Stars: 5 - Forks: 5
InsightSoftwareConsortium/ITKIOOpenSlide
An ITK ImageIO module for the OpenSlide library.
Language: C++ - Size: 148 KB - Last synced at: 9 days ago - Pushed at: 4 months ago - Stars: 12 - Forks: 9
InsightSoftwareConsortium/ITKFixedPointInverseDisplacementField Fork of fbudin69500/ITKFixedPointInverseDisplacementField
ITK filter to compute the inverse displacement field.
Language: C++ - Size: 5.16 MB - Last synced at: 9 days ago - Pushed at: 4 months ago - Stars: 3 - Forks: 4
InsightSoftwareConsortium/ITKRingArtifact
ITK filters to reduce ring artifacts common in x-ray computed tomography.
Language: C++ - Size: 62.5 KB - Last synced at: 9 days ago - Pushed at: about 1 year ago - Stars: 6 - Forks: 4
InsightSoftwareConsortium/ITKSubdivisionQuadEdgeMeshFilter
Classes for ITK triangle mesh subdivision
Language: C++ - Size: 261 KB - Last synced at: 9 days ago - Pushed at: 4 months ago - Stars: 3 - Forks: 5
InsightSoftwareConsortium/ITKPolarTransform
A module for ITK to transform from cartesian to polar coordinate systems and back.
Language: C++ - Size: 206 KB - Last synced at: 9 days ago - Pushed at: 4 months ago - Stars: 1 - Forks: 5
InsightSoftwareConsortium/ITKAnisotropicDiffusionLBR
Smoothing while preserving edges and coherent structures in images with anisotropic diffusion using lattice basis reduction
Language: C++ - Size: 1.85 MB - Last synced at: 9 days ago - Pushed at: 4 months ago - Stars: 10 - Forks: 6
InsightSoftwareConsortium/ITKBioCell
This remote module contains classes related to segmentation of biological cells. It has classes to represent cells' shape, color, and growth state. It also has classes to represent a cell genome, whose expression is modeled by differential equations.
Language: C++ - Size: 6.61 MB - Last synced at: 8 days ago - Pushed at: 4 months ago - Stars: 2 - Forks: 4
InsightSoftwareConsortium/ITKMeshNoise
Classes to perturb ITK mesh objects with Gaussian noise
Language: C++ - Size: 75.2 KB - Last synced at: 9 days ago - Pushed at: 4 months ago - Stars: 2 - Forks: 4
InsightSoftwareConsortium/ITKMontage Fork of luisibanez/ImageReconstruction
Montaging for microscopy imaging files
Language: C++ - Size: 8.72 MB - Last synced at: 8 days ago - Pushed at: about 1 month ago - Stars: 30 - Forks: 17
InsightSoftwareConsortium/ITKTwoProjectionRegistration Fork of midas-journal/midas-journal-784
ITK-Based Implementation of Two-Projection 2D/3D Registration Method with an Application in Patient Setup for External Beam Radiotherapy
Language: C++ - Size: 211 KB - Last synced at: 9 days ago - Pushed at: 4 months ago - Stars: 53 - Forks: 18
InsightSoftwareConsortium/ITKModuleTemplate Fork of blowekamp/itkExternalTemplate
A template to start an ITK Module
Language: C++ - Size: 313 KB - Last synced at: 9 days ago - Pushed at: 5 months ago - Stars: 13 - Forks: 17
InsightSoftwareConsortium/ITKBoneMorphometry
ITK filters that quantify bone morphometry
Language: C++ - Size: 1.81 MB - Last synced at: 4 days ago - Pushed at: 4 months ago - Stars: 7 - Forks: 8
InsightSoftwareConsortium/ITKAnalyzeObjectMap
Reader/Writer for Analyze Object Maps
Language: C++ - Size: 203 KB - Last synced at: 9 days ago - Pushed at: 5 months ago - Stars: 0 - Forks: 5
InsightSoftwareConsortium/ITKCuberille Fork of midas-journal/midas-journal-740
Cuberille Implicit Surface Polygonization for ITK
Language: C++ - Size: 477 KB - Last synced at: 9 days ago - Pushed at: 5 months ago - Stars: 5 - Forks: 10
InsightSoftwareConsortium/ITKNDReg
Language: C++ - Size: 145 KB - Last synced at: 9 days ago - Pushed at: 6 months ago - Stars: 5 - Forks: 2
InsightSoftwareConsortium/ITKPrincipalComponentsAnalysis Fork of johan-andruejol/ITKPCA
An ITK-based implementation of principal components analysis. A more detailed description can be found in the Insight Journal article: Bowers M., Younes L. ''Principal Components Analysis of Scalar, Vector, and Mesh Vertex Data.'' August, 2013.
Language: C++ - Size: 693 KB - Last synced at: 9 days ago - Pushed at: 6 months ago - Stars: 2 - Forks: 4
KitwareMedical/ITKStrain
ITK filters to estimate a strain tensor field from a displacement field or a spatial transformation.
Language: C++ - Size: 268 KB - Last synced at: 1 day ago - Pushed at: 6 months ago - Stars: 10 - Forks: 11
InsightSoftwareConsortium/ITKIOFDF
Implement's Glenn Pierce's itk::FDFImageIO as an ITK Remote Module
Language: C++ - Size: 360 KB - Last synced at: 9 days ago - Pushed at: 4 months ago - Stars: 2 - Forks: 10
InsightSoftwareConsortium/ITKTotalVariation
External Module for Total Variation Algorithms, providing wrap for https://github.com/albarji/proxTV
Language: C++ - Size: 132 KB - Last synced at: 9 days ago - Pushed at: 4 months ago - Stars: 10 - Forks: 10
KitwareMedical/ITKPhaseSymmetry Fork of thewtex/ITKPhaseSymmetry
Multi-scale Steerable Phase-Symmetry Filters for ITK
Language: C++ - Size: 258 KB - Last synced at: 1 day ago - Pushed at: 6 months ago - Stars: 2 - Forks: 10
slicersalt/ITKShape
ITK-Based Shape Analysis Filters (e.g Procrustes Alignment for Meshes)
Language: C++ - Size: 54.7 KB - Last synced at: 3 months ago - Pushed at: 6 months ago - Stars: 4 - Forks: 6
KitwareMedical/ITKRLEImage
Run-length encoded memory compression scheme for an itk::Image
Language: C++ - Size: 1 MB - Last synced at: 4 months ago - Pushed at: 6 months ago - Stars: 4 - Forks: 9
InsightSoftwareConsortium/ITKBoneEnhancement Fork of Besler/ITKBoneEnhancement
Language: C++ - Size: 378 KB - Last synced at: 9 days ago - Pushed at: 4 months ago - Stars: 5 - Forks: 8
InsightSoftwareConsortium/ITKMGHImageIO
ITK IO for images stored in mgh, mgz and mgh.gz formats.
Language: C++ - Size: 115 KB - Last synced at: 9 days ago - Pushed at: 4 months ago - Stars: 3 - Forks: 14
InsightSoftwareConsortium/ITKSkullStrip Fork of lorensen/skullStrip
Perform automatic skull-stripping for neuroimage analysis
Language: C++ - Size: 11.8 MB - Last synced at: 9 days ago - Pushed at: 4 months ago - Stars: 13 - Forks: 4
dyollb/ITKTopologyControl
ITK external module to control topology of binary mask regions
Language: C++ - Size: 5.24 MB - Last synced at: 3 months ago - Pushed at: 11 months ago - Stars: 1 - Forks: 5
InsightSoftwareConsortium/ITKWavelet Fork of phcerdan/ITKWavelet
External module for ITK providing Wavelet. Forked from OrfeoToolBox
Language: C++ - Size: 137 KB - Last synced at: 9 days ago - Pushed at: 11 months ago - Stars: 0 - Forks: 2
InsightSoftwareConsortium/ITKVariationalRegistration Fork of VariationalRegistration/VariationalRegistration
Language: C++ - Size: 4.82 MB - Last synced at: 9 days ago - Pushed at: 4 months ago - Stars: 1 - Forks: 5
InsightSoftwareConsortium/ITKIOTransformDCMTK
An ITK module to read DICOM spatial transforms.
Language: C++ - Size: 94.7 KB - Last synced at: 9 days ago - Pushed at: 4 months ago - Stars: 3 - Forks: 9
InsightSoftwareConsortium/ITKArrayFire
ArrayFire-backed ITK pipelines
Language: C++ - Size: 41 KB - Last synced at: 9 days ago - Pushed at: 11 months ago - Stars: 5 - Forks: 5
InsightSoftwareConsortium/ITKParabolicMorphology Fork of richardbeare/parabolicMorphology
ITK routines for erosions/dilations using parabolic structuring functions
Language: C++ - Size: 8.58 MB - Last synced at: 8 days ago - Pushed at: 4 months ago - Stars: 3 - Forks: 5
dyollb/ITKDissolve
ITK external module to dissolve masked regions
Language: C++ - Size: 37.1 KB - Last synced at: 28 days ago - Pushed at: 11 months ago - Stars: 1 - Forks: 0
InsightSoftwareConsortium/ITKHigherOrderAccurateGradient
Filters for calculating higher order accurate numerical derivatives and gradients.
Language: C++ - Size: 8.6 MB - Last synced at: 8 days ago - Pushed at: 4 months ago - Stars: 1 - Forks: 6
InsightSoftwareConsortium/ITKIOMeshSTL Fork of luisibanez/ITKSTLMeshIO
MeshIO class to read and write ITK meshes into STL files
Language: C++ - Size: 136 KB - Last synced at: 9 days ago - Pushed at: 5 months ago - Stars: 9 - Forks: 7
InsightSoftwareConsortium/ITKSmoothingRecursiveYvvGaussian Fork of Inria-Asclepios/SmoothingRecursiveYvvGaussianFilter
External module for ITK v4 implementing the Young & Van Vliet recursive gaussian smoothing filter.
Language: C++ - Size: 6.35 MB - Last synced at: 9 days ago - Pushed at: 4 months ago - Stars: 2 - Forks: 5
InsightSoftwareConsortium/ITKNeuralNetworks 📦
This remote module contains classes and support classes for the calculation of artificial neural networks. This can be used, for instance, for image classification.
Language: C++ - Size: 110 KB - Last synced at: 9 days ago - Pushed at: about 1 year ago - Stars: 2 - Forks: 4
KitwareMedical/ITKMultipleImageIterator
ITK remote module from an IJ article at http://www.insight-journal.org/browse/publication/915
Language: C++ - Size: 181 KB - Last synced at: 1 day ago - Pushed at: about 1 year ago - Stars: 1 - Forks: 5
argaja10/Liver-tumor-segmentation
This project explores various image analysis techniques to segment liver tumor in CT scans.
Language: Jupyter Notebook - Size: 3.6 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0
InsightSoftwareConsortium/ITKWikiExamples
Scraped, buildable version of the wiki examples
Size: 17 MB - Last synced at: 9 days ago - Pushed at: about 6 years ago - Stars: 20 - Forks: 22
blowekamp/itkOBBLabelMap
An ITK external module which extends the LabelMap to include Oriented Bounding Box attributes.
Language: C++ - Size: 14.5 MB - Last synced at: 4 months ago - Pushed at: almost 10 years ago - Stars: 5 - Forks: 2
blowekamp/ITKSimpleITKFilters Fork of SimpleITK/ITKSimpleITKFilters
An ITK Module with a collection of additional filters for SimpleITK
Language: C++ - Size: 144 KB - Last synced at: over 2 years ago - Pushed at: over 2 years ago - Stars: 0 - Forks: 0
blowekamp/itkSuperPixel 📦
The filters from this module were integrated into ITK version 5. https://github.com/InsightSoftwareConsortium/ITK/tree/master/Modules/Segmentation/SuperPixel
Language: C++ - Size: 16.5 MB - Last synced at: over 2 years ago - Pushed at: over 5 years ago - Stars: 5 - Forks: 3
anmaithien/Retinal-Images-Mosaicking
This is my project to get started with Computer Vision
Language: MATLAB - Size: 4.99 MB - Last synced at: over 2 years ago - Pushed at: about 6 years ago - Stars: 3 - Forks: 0
SimpleITK/ITKSimpleITKFilters
An ITK Module with a collection of additional filters for SimpleITK
Language: C++ - Size: 123 KB - Last synced at: 4 days ago - Pushed at: over 2 years ago - Stars: 2 - Forks: 9
blowekamp/itkStreamingSinc
An ITK external module for filters consuming images in a streaming fashion
Language: C++ - Size: 76.2 KB - Last synced at: 4 months ago - Pushed at: about 6 years ago - Stars: 4 - Forks: 2
blowekamp/itkScaleSpace
An ITKv4 External Module for Scale Space Algorithms and Computation
Language: C++ - Size: 22.5 KB - Last synced at: 4 months ago - Pushed at: about 8 years ago - Stars: 3 - Forks: 2
blowekamp/itkBinShrink
An ITK external repository for a filter which reduces the size of an image and runs the averages.
Language: C++ - Size: 996 KB - Last synced at: 4 months ago - Pushed at: almost 10 years ago - Stars: 0 - Forks: 1
blowekamp/itkTextureAnalysis
This is an ITKv4 external module for performing texture analysis on images
Language: C++ - Size: 64.5 KB - Last synced at: 4 months ago - Pushed at: over 9 years ago - Stars: 1 - Forks: 0
InsightSoftwareConsortium/scifio-imageio Fork of scifio/scifio-imageio
SCIFIO ImageIO plugin for ITK
Language: C++ - Size: 196 KB - Last synced at: 9 days ago - Pushed at: about 1 month ago - Stars: 0 - Forks: 1