Ecosyste.ms: Repos

An open API service providing repository metadata for many open source software ecosystems.

GitHub topics: medical-imaging

kmario23/deep-learning-drizzle

Drench yourself in Deep Learning, Reinforcement Learning, Machine Learning, Computer Vision, and NLP by learning from these exciting lectures!!

Language: HTML - Size: 441 KB - Last synced: 3 months ago - Pushed: 4 months ago - Stars: 11,631 - Forks: 2,864

OHIF/Viewers

OHIF zero-footprint DICOM viewer and oncology specific Lesion Tracker, plus shared extension packages

Language: TypeScript - Size: 271 MB - Last synced: 28 days ago - Pushed: 28 days ago - Stars: 2,896 - Forks: 3,014

xinario/awesome-gan-for-medical-imaging

Awesome GAN for Medical Imaging

Size: 154 KB - Last synced: about 1 month ago - Pushed: almost 2 years ago - Stars: 2,224 - Forks: 458

MrGiovanni/UNetPlusPlus

[IEEE TMI] Official Implementation for UNet++

Language: Python - Size: 6.03 MB - Last synced: 6 days ago - Pushed: 6 months ago - Stars: 2,182 - Forks: 531

cornerstonejs/cornerstone

JavaScript library to display interactive medical images including but not limited to DICOM

Language: JavaScript - Size: 18 MB - Last synced: about 22 hours ago - Pushed: 2 months ago - Stars: 2,013 - Forks: 591

sfikas/medical-imaging-datasets

A list of Medical imaging datasets.

Size: 27.3 KB - Last synced: about 1 month ago - Pushed: 6 months ago - Stars: 2,011 - Forks: 397

nitrain/nitrain

The easiest way to train AI models on medical images with pytorch or keras

Language: Python - Size: 6.05 MB - Last synced: about 1 month ago - Pushed: about 1 month ago - Stars: 1,844 - Forks: 302

linhandev/dataset

医学影像数据集列表 『An Index for Medical Imaging Datasets』

Size: 15.2 MB - Last synced: 6 months ago - Pushed: over 1 year ago - Stars: 1,717 - Forks: 289

black0017/MedicalZooPytorch

A pytorch-based deep learning framework for multi-modal 2D/3D medical image segmentation

Language: Python - Size: 61.4 MB - Last synced: about 1 month ago - Pushed: about 2 years ago - Stars: 1,602 - Forks: 290

ivmartel/dwv

DICOM Web Viewer: open source zero footprint medical image library.

Language: JavaScript - Size: 126 MB - Last synced: 17 days ago - Pushed: 24 days ago - Stars: 1,599 - Forks: 583

albarqouni/Deep-Learning-for-Medical-Applications

Deep Learning Papers on Medical Image Analysis

Language: TeX - Size: 84 KB - Last synced: about 10 hours ago - Pushed: about 2 years ago - Stars: 1,536 - Forks: 499

Slicer/Slicer

Multi-platform, free open source software for visualization and image computing.

Language: C++ - Size: 121 MB - Last synced: about 1 month ago - Pushed: about 1 month ago - Stars: 1,459 - Forks: 502

DLTK/DLTK

Deep Learning Toolkit for Medical Image Analysis

Language: Python - Size: 18.6 MB - Last synced: 3 months ago - Pushed: about 1 year ago - Stars: 1,418 - Forks: 406

NifTK/NiftyNet 📦

[unmaintained] An open-source convolutional neural networks platform for research in medical image analysis and image-guided therapy

Language: Python - Size: 11 MB - Last synced: 24 days ago - Pushed: about 4 years ago - Stars: 1,356 - Forks: 404

InsightSoftwareConsortium/ITK

Insight Toolkit (ITK) -- Official Repository. ITK builds on a proven, spatially-oriented architecture for processing, segmentation, and registration of scientific images in two, three, or more dimensions.

Language: C++ - Size: 195 MB - Last synced: about 1 month ago - Pushed: about 1 month ago - Stars: 1,336 - Forks: 647

MIC-DKFZ/medicaldetectiontoolkit

The Medical Detection Toolkit contains 2D + 3D implementations of prevalent object detectors such as Mask R-CNN, Retina Net, Retina U-Net, as well as a training and inference framework focused on dealing with medical images.

Language: Python - Size: 4.35 MB - Last synced: about 16 hours ago - Pushed: about 2 months ago - Stars: 1,269 - Forks: 299

facebookresearch/fastMRI

A large-scale dataset of both raw MRI measurements and clinical MRI images.

Language: Python - Size: 1.31 MB - Last synced: about 1 month ago - Pushed: 4 months ago - Stars: 1,239 - Forks: 368

JunMa11/MICCAI-OpenSourcePapers

MICCAI 2019-2023 Open Source Papers

Size: 2.85 MB - Last synced: 5 days ago - Pushed: 7 months ago - Stars: 1,138 - Forks: 229

fahadshamshad/awesome-transformers-in-medical-imaging

A collection of resources on applications of Transformers in Medical Imaging.

Size: 3.92 MB - Last synced: 1 day ago - Pushed: about 1 month ago - Stars: 1,119 - Forks: 170

AIM-Harvard/pyradiomics

Open-source python package for the extraction of Radiomics features from 2D and 3D images and binary masks. Support: https://discourse.slicer.org/c/community/radiomics

Language: Jupyter Notebook - Size: 53.3 MB - Last synced: 3 days ago - Pushed: 3 days ago - Stars: 1,082 - Forks: 480

amirhossein-kz/Awesome-Diffusion-Models-in-Medical-Imaging

Diffusion Models in Medical Imaging (Published in Medical Image Analysis Journal)

Size: 653 KB - Last synced: about 1 month ago - Pushed: about 1 month ago - Stars: 1,077 - Forks: 109

fo-dicom/fo-dicom

Fellow Oak DICOM for .NET, .NET Core, Universal Windows, Android, iOS, Mono and Unity

Language: C# - Size: 165 MB - Last synced: about 8 hours ago - Pushed: about 18 hours ago - Stars: 1,025 - Forks: 630

deepmedic/deepmedic

Efficient Multi-Scale 3D Convolutional Neural Network for Segmentation of 3D Medical Scans

Language: Python - Size: 48 MB - Last synced: 1 day ago - Pushed: 7 months ago - Stars: 998 - Forks: 339

patrick-llgc/Learning-Deep-Learning

Paper reading notes on Deep Learning and Machine Learning

Language: Jupyter Notebook - Size: 86.8 MB - Last synced: 2 months ago - Pushed: 2 months ago - Stars: 988 - Forks: 168

MedMNIST/MedMNIST

[pip install medmnist] 18x Standardized Datasets for 2D and 3D Biomedical Image Classification

Language: Python - Size: 13.6 MB - Last synced: 6 days ago - Pushed: 6 days ago - Stars: 977 - Forks: 154

KidsWithTokens/MedSegDiff

Medical Image Segmentation with Diffusion Model

Language: Python - Size: 3.7 MB - Last synced: 20 days ago - Pushed: 20 days ago - Stars: 923 - Forks: 136

suyashkumar/dicom

⚡High Performance DICOM Medical Image Parser in Go.

Language: Go - Size: 29.6 MB - Last synced: 2 months ago - Pushed: 2 months ago - Stars: 885 - Forks: 129

Slicer/SlicerGitSVNArchive

:warning: OBSOLETE | Multi-platform, free open source software for visualization and image computing.

Language: C++ - Size: 448 MB - Last synced: 3 months ago - Pushed: about 2 years ago - Stars: 875 - Forks: 468

mlmed/torchxrayvision

TorchXRayVision: A library of chest X-ray datasets and models. Classifiers, segmentation, and autoencoders.

Language: Jupyter Notebook - Size: 43.8 MB - Last synced: 5 days ago - Pushed: 6 days ago - Stars: 841 - Forks: 207

perone/medicaltorch

A medical imaging framework for Pytorch

Language: Python - Size: 790 KB - Last synced: about 19 hours ago - Pushed: 23 days ago - Stars: 834 - Forks: 126

nyukat/breast_cancer_classifier

Deep Neural Networks Improve Radiologists' Performance in Breast Cancer Screening

Language: Jupyter Notebook - Size: 222 MB - Last synced: 30 days ago - Pushed: 5 months ago - Stars: 824 - Forks: 256

commontk/CTK

A set of common support code for medical imaging, surgical navigation, and related purposes.

Language: C++ - Size: 17.2 MB - Last synced: 3 days ago - Pushed: 3 days ago - Stars: 802 - Forks: 476

KidsWithTokens/Medical-SAM-Adapter

Adapting Segment Anything Model for Medical Image Segmentation

Language: Python - Size: 16.7 MB - Last synced: about 2 months ago - Pushed: about 2 months ago - Stars: 787 - Forks: 59

jeya-maria-jose/Medical-Transformer

Official Pytorch Code for "Medical Transformer: Gated Axial-Attention for Medical Image Segmentation" - MICCAI 2021

Language: Python - Size: 1.16 MB - Last synced: about 1 month ago - Pushed: about 1 year ago - Stars: 771 - Forks: 172

nroduit/Weasis

Weasis is a DICOM viewer available as a desktop application or as a web-based application.

Language: Java - Size: 28.9 MB - Last synced: 8 days ago - Pushed: 8 days ago - Stars: 737 - Forks: 277

adalca/medical-datasets

tracking medical datasets, with a focus on medical imaging

Size: 92.8 KB - Last synced: 6 months ago - Pushed: 6 months ago - Stars: 674 - Forks: 110

dipy/dipy

DIPY is the paragon 3D/4D+ imaging library in Python. Contains generic methods for spatial normalization, signal processing, machine learning, statistical analysis and visualization of medical images. Additionally, it contains specialized methods for computational anatomy including diffusion, perfusion and structural imaging.

Language: Python - Size: 70.2 MB - Last synced: 20 days ago - Pushed: 20 days ago - Stars: 669 - Forks: 428

hollobit/All-About-the-GAN

All About the GANs(Generative Adversarial Networks) - Summarized lists for GAN

Language: Python - Size: 4.12 MB - Last synced: 3 months ago - Pushed: over 5 years ago - Stars: 654 - Forks: 156

MITK/MITK

The Medical Imaging Interaction Toolkit.

Language: C++ - Size: 236 MB - Last synced: 4 days ago - Pushed: 4 days ago - Stars: 650 - Forks: 322

ternaus/robot-surgery-segmentation

Wining solution and its improvement for MICCAI 2017 Robotic Instrument Segmentation Sub-Challenge

Language: Jupyter Notebook - Size: 323 MB - Last synced: 19 days ago - Pushed: about 2 months ago - Stars: 617 - Forks: 211

juliandewit/kaggle_ndsb2017

Kaggle datascience bowl 2017

Language: Python - Size: 71.3 KB - Last synced: 7 months ago - Pushed: 11 months ago - Stars: 615 - Forks: 291

JoHof/lungmask

Automated lung segmentation in CT

Language: Python - Size: 2.43 MB - Last synced: 12 days ago - Pushed: about 1 month ago - Stars: 613 - Forks: 144

cornerstonejs/cornerstoneTools

A framework for tools built on top of Cornerstone.

Language: JavaScript - Size: 63.5 MB - Last synced: 1 day ago - Pushed: 3 months ago - Stars: 574 - Forks: 456

Project-MONAI/MONAILabel

MONAI Label is an intelligent open source image labeling and learning tool.

Language: Python - Size: 47.7 MB - Last synced: 3 days ago - Pushed: 3 days ago - Stars: 550 - Forks: 179

microsoft/InnerEye-DeepLearning 📦

Medical Imaging Deep Learning library to train and deploy 3D segmentation models on Azure Machine Learning

Language: Python - Size: 8.55 MB - Last synced: about 1 month ago - Pushed: about 2 months ago - Stars: 537 - Forks: 140

MIC-DKFZ/nnDetection

nnDetection is a self-configuring framework for 3D (volumetric) medical object detection which can be applied to new data sets without manual intervention. It includes guides for 12 data sets that were used to develop and evaluate the performance of the proposed method.

Language: Python - Size: 1.24 MB - Last synced: 6 days ago - Pushed: 3 months ago - Stars: 508 - Forks: 83

Project-MONAI/GenerativeModels

MONAI Generative Models makes it easy to train, evaluate, and deploy generative models and related applications

Language: Jupyter Notebook - Size: 13.9 MB - Last synced: 2 months ago - Pushed: 2 months ago - Stars: 493 - Forks: 67

zsdonghao/u-net-brain-tumor

U-Net Brain Tumor Segmentation

Language: Python - Size: 1 MB - Last synced: about 1 month ago - Pushed: almost 5 years ago - Stars: 484 - Forks: 180

cornerstonejs/cornerstone3D

Cornerstone is a set of JavaScript libraries that can be used to build web-based medical imaging applications. It provides a framework to build radiology applications such as the OHIF Viewer.

Language: TypeScript - Size: 210 MB - Last synced: 2 days ago - Pushed: 2 days ago - Stars: 449 - Forks: 241

microsoft/dicom-server

OSS Implementation of DICOMweb standard

Language: JavaScript - Size: 23.4 MB - Last synced: 2 days ago - Pushed: 3 days ago - Stars: 437 - Forks: 164

315386775/DeepLearing-Interview-Awesome-2024

AIGC-interview/CV-interview/LLMs-interview面试问题与答案集合仓,同时包含工作和科研过程中的新想法、新问题、新资源与新项目

Size: 1.19 MB - Last synced: about 1 month ago - Pushed: about 1 month ago - Stars: 435 - Forks: 57

bioinformatics-ua/dicoogle

Dicoogle - Open Source PACS

Language: Java - Size: 24.8 MB - Last synced: 24 days ago - Pushed: 25 days ago - Stars: 415 - Forks: 127

ethanhe42/u-net

U-Net: Convolutional Networks for Biomedical Image Segmentation

Language: Python - Size: 10.7 MB - Last synced: about 1 month ago - Pushed: about 2 years ago - Stars: 415 - Forks: 161

hitachinsk/SAMed

The implementation of the technical report: "Customized Segment Anything Model for Medical Image Segmentation"

Language: Python - Size: 617 KB - Last synced: 2 days ago - Pushed: 9 months ago - Stars: 414 - Forks: 37

smistad/FAST

A framework for high-performance medical image processing, neural network inference and visualization

Language: C++ - Size: 19.2 MB - Last synced: 20 days ago - Pushed: 20 days ago - Stars: 402 - Forks: 98

frankkramer-lab/MIScnn

A framework for Medical Image Segmentation with Convolutional Neural Networks and Deep Learning

Language: Python - Size: 133 MB - Last synced: 9 days ago - Pushed: about 1 year ago - Stars: 395 - Forks: 117

Enet4/dicom-rs

Rust implementation of the DICOM standard

Language: Rust - Size: 4.72 MB - Last synced: about 1 month ago - Pushed: about 1 month ago - Stars: 390 - Forks: 69

jeya-maria-jose/UNeXt-pytorch

Official Pytorch Code base for "UNeXt: MLP-based Rapid Medical Image Segmentation Network", MICCAI 2022

Language: Python - Size: 604 KB - Last synced: 6 months ago - Pushed: 8 months ago - Stars: 375 - Forks: 64

nibtehaz/MultiResUNet

MultiResUNet : Rethinking the U-Net architecture for multimodal biomedical image segmentation

Language: Jupyter Notebook - Size: 439 KB - Last synced: 7 months ago - Pushed: over 1 year ago - Stars: 370 - Forks: 83

Borda/pyImSegm 📦

Image segmentation - general superpixel segmentation & center detection & region growing

Language: Python - Size: 21.8 MB - Last synced: 12 days ago - Pushed: over 2 years ago - Stars: 364 - Forks: 74

malaterre/GDCM

Grassroots DICOM read-only mirror. Only for Pull Request. Please report bug at http://sf.net/p/gdcm

Language: C++ - Size: 36.4 MB - Last synced: about 1 month ago - Pushed: about 1 month ago - Stars: 335 - Forks: 175

richard-peng-xia/awesome-multimodal-in-medical-imaging

A collection of resources on applications of multi-modal learning in medical imaging.

Size: 273 KB - Last synced: 6 days ago - Pushed: 15 days ago - Stars: 332 - Forks: 33

Shenggan/BCCD_Dataset

BCCD (Blood Cell Count and Detection) Dataset is a small-scale dataset for blood cells detection.

Language: Python - Size: 7.22 MB - Last synced: 7 months ago - Pushed: over 2 years ago - Stars: 332 - Forks: 202

jeya-maria-jose/KiU-Net-pytorch

Official Pytorch Code of KiU-Net for Image/3D Segmentation - MICCAI 2020 (Oral), IEEE TMI

Language: Python - Size: 244 KB - Last synced: 7 months ago - Pushed: 11 months ago - Stars: 316 - Forks: 73

adalca/neurite

Neural networks toolbox focused on medical image analysis

Language: Python - Size: 776 KB - Last synced: 12 days ago - Pushed: 24 days ago - Stars: 316 - Forks: 65

rapidsai/cucim

cuCIM - RAPIDS GPU-accelerated image processing library

Language: Jupyter Notebook - Size: 23.7 MB - Last synced: 3 days ago - Pushed: 4 days ago - Stars: 311 - Forks: 54

thtang/CheXNet-with-localization

Weakly Supervised Learning for Findings Detection in Medical Images

Language: Python - Size: 174 MB - Last synced: 6 months ago - Pushed: almost 2 years ago - Stars: 306 - Forks: 108

Peter554/StainTools 📦

Tools for tissue image stain normalisation and augmentation in Python 3

Language: Python - Size: 63 MB - Last synced: 2 days ago - Pushed: about 3 years ago - Stars: 304 - Forks: 109

IBBM/Cascaded-FCN

Source code for the MICCAI 2016 Paper "Automatic Liver and Lesion Segmentation in CT Using Cascaded Fully Convolutional NeuralNetworks and 3D Conditional Random Fields"

Language: Jupyter Notebook - Size: 6.06 MB - Last synced: 7 months ago - Pushed: over 6 years ago - Stars: 302 - Forks: 128

ayush1997/Xvision

Chest Xray image analysis using Deep learning !

Language: Python - Size: 7.29 MB - Last synced: 2 months ago - Pushed: over 4 years ago - Stars: 301 - Forks: 129

dcmjs-org/dcmjs

Javascript implementation of DICOM manipulation

Language: JavaScript - Size: 21.5 MB - Last synced: 1 day ago - Pushed: 13 days ago - Stars: 284 - Forks: 105

MIC-DKFZ/MedNeXt

MedNeXt is a fully ConvNeXt architecture for 3D medical image segmentation (MICCAI 2023).

Language: Python - Size: 548 KB - Last synced: 6 days ago - Pushed: 28 days ago - Stars: 256 - Forks: 20

neuroneural/brainchop

Brainchop: In-browser 3D MRI rendering and segmentation

Language: JavaScript - Size: 352 MB - Last synced: 1 day ago - Pushed: 1 day ago - Stars: 242 - Forks: 31

almarklein/visvis

Visvis - the object oriented approach to visualization

Language: Python - Size: 6.28 MB - Last synced: 2 months ago - Pushed: 2 months ago - Stars: 226 - Forks: 26

OpenGATE/Gate

Official public repository of Gate

Language: C++ - Size: 26.8 MB - Last synced: 8 days ago - Pushed: about 1 month ago - Stars: 225 - Forks: 256

delira-dev/delira 📦

Lightweight framework for fast prototyping and training deep neural networks with PyTorch and TensorFlow

Language: Python - Size: 7.8 MB - Last synced: 2 days ago - Pushed: over 3 years ago - Stars: 222 - Forks: 26

yhygao/CBIM-Medical-Image-Segmentation

A PyTorch framework for medical image segmentation

Language: Python - Size: 299 KB - Last synced: about 2 months ago - Pushed: about 2 months ago - Stars: 222 - Forks: 43

NKI-AI/direct

Deep learning framework for MRI reconstruction

Language: Python - Size: 32 MB - Last synced: 2 days ago - Pushed: 3 days ago - Stars: 221 - Forks: 40

analysiscenter/radio

RadIO is a library for data science research of computed tomography imaging

Language: Jupyter Notebook - Size: 11.8 MB - Last synced: about 1 month ago - Pushed: over 2 years ago - Stars: 219 - Forks: 52

AlizaMedicalImaging/AlizaMS

DICOM Viewer

Language: C++ - Size: 16.9 MB - Last synced: about 1 month ago - Pushed: about 1 month ago - Stars: 217 - Forks: 39

ayselafsar/dicomviewer

DICOM Viewer in Nextcloud

Language: JavaScript - Size: 22.6 MB - Last synced: about 1 month ago - Pushed: about 1 month ago - Stars: 214 - Forks: 49

DebeshJha/2020-CBMS-DoubleU-Net

DoubleU-Net for Semantic Image Segmentation in TensorFlow & Pytorch (Nominated for Best Paper Award (IEEE CBMS))

Language: Python - Size: 1.5 MB - Last synced: 7 months ago - Pushed: 7 months ago - Stars: 206 - Forks: 66

amanchadha/coursera-ai-for-medicine-specialization

Programming assignments, labs and quizzes from all courses in the Coursera AI for Medicine Specialization offered by deeplearning.ai

Language: Jupyter Notebook - Size: 630 MB - Last synced: 6 months ago - Pushed: almost 3 years ago - Stars: 204 - Forks: 168

fepegar/awesome-medical-imaging

Awesome list of software that I use to do research in medical imaging.

Size: 15.6 KB - Last synced: 1 day ago - Pushed: about 4 years ago - Stars: 202 - Forks: 34

CODAIT/deep-histopath

A deep learning approach to predicting breast tumor proliferation scores for the TUPAC16 challenge

Language: Jupyter Notebook - Size: 49.5 MB - Last synced: 18 days ago - Pushed: about 5 years ago - Stars: 199 - Forks: 86

ImagingLab/ICIAR2018

Two-Stage Convolutional Neural Network for Breast Cancer Histology Image Classification. ICIAR 2018 Grand Challenge on BreAst Cancer Histology images (BACH)

Language: Python - Size: 100 MB - Last synced: 7 months ago - Pushed: over 4 years ago - Stars: 197 - Forks: 74

natandrade/Tutorial-Medical-Image-Registration

Medical Image Registration

Language: Jupyter Notebook - Size: 98.6 KB - Last synced: 3 months ago - Pushed: over 4 years ago - Stars: 196 - Forks: 40

qurit/rt-utils

A minimal Python library to facilitate the creation and manipulation of DICOM RTStructs.

Language: Python - Size: 2.31 MB - Last synced: 6 days ago - Pushed: 6 days ago - Stars: 176 - Forks: 55

YuanXue1993/SegAN

SegAN: Semantic Segmentation with Adversarial Learning

Language: Python - Size: 322 KB - Last synced: 7 months ago - Pushed: about 6 years ago - Stars: 175 - Forks: 57

BioMedIA/MIRTK

The Medical Image Registration ToolKit (MIRTK), the successor of the IRTK, contains common CMake build configuration files, core libraries, and basic command-line tools. Extension packages are hosted by the MIRTK GitHub group at

Language: C++ - Size: 6.67 MB - Last synced: 2 months ago - Pushed: almost 2 years ago - Stars: 172 - Forks: 71

amiralansary/rl-medical

Deep Reinforcement Learning (DRL) agents applied to medical images

Language: Python - Size: 158 MB - Last synced: 7 months ago - Pushed: over 3 years ago - Stars: 172 - Forks: 67

CBICA/CaPTk

Cancer Imaging Phenomics Toolkit (CaPTk) is a software platform to perform image analysis and predictive modeling tasks. Documentation: https://cbica.github.io/CaPTk

Language: C++ - Size: 239 MB - Last synced: 12 days ago - Pushed: 5 months ago - Stars: 169 - Forks: 63

leoliuf/MRiLab

A Numerical Magnetic Resonance Imaging (MRI) Simulation Platform

Language: MATLAB - Size: 113 MB - Last synced: 7 months ago - Pushed: over 3 years ago - Stars: 168 - Forks: 60

comic/grand-challenge.org

A platform for end-to-end development of machine learning solutions in biomedical imaging

Language: Python - Size: 57.6 MB - Last synced: about 1 month ago - Pushed: about 1 month ago - Stars: 161 - Forks: 49

josedolz/LiviaNET

This repository contains the code of LiviaNET, a 3D fully convolutional neural network that was employed in our work: "3D fully convolutional networks for subcortical segmentation in MRI: A large-scale study"

Language: Python - Size: 12.1 MB - Last synced: 7 months ago - Pushed: over 4 years ago - Stars: 160 - Forks: 52

minerva-ml/open-solution-data-science-bowl-2018 📦

Open solution to the Data Science Bowl 2018

Language: Python - Size: 7.03 MB - Last synced: 27 days ago - Pushed: almost 2 years ago - Stars: 158 - Forks: 41

fitushar/3D-Medical-Imaging-Preprocessing-All-you-need

This Repo Will contain the Preprocessing Code for 3D Medical Imaging

Language: Jupyter Notebook - Size: 43.1 MB - Last synced: about 1 month ago - Pushed: almost 4 years ago - Stars: 158 - Forks: 35

facebookresearch/CovidPrognosis 📦

COVID deterioration prediction based on chest X-ray radiographs via MoCo-trained image representations

Language: Python - Size: 35.2 KB - Last synced: 3 months ago - Pushed: over 1 year ago - Stars: 157 - Forks: 41

aramis-lab/clinicadl

Framework for the reproducible processing of neuroimaging data with deep learning methods

Language: Python - Size: 9.8 MB - Last synced: 3 days ago - Pushed: 3 days ago - Stars: 152 - Forks: 52

mne-tools/mne-cpp

MNE-CPP: A Framework for Electrophysiology

Language: C++ - Size: 349 MB - Last synced: 20 days ago - Pushed: 20 days ago - Stars: 148 - Forks: 137

Related Keywords
medical-imaging 1,586 deep-learning 600 segmentation 232 pytorch 229 machine-learning 222 python 191 computer-vision 177 medical-image-processing 150 dicom 142 convolutional-neural-networks 134 image-processing 133 tensorflow 118 image-segmentation 115 medical-image-analysis 99 cnn 88 medical 85 mri 78 unet 64 keras 64 deep-neural-networks 63 classification 62 artificial-intelligence 60 image-classification 60 semantic-segmentation 50 dataset 47 ai 43 medical-image-segmentation 42 matlab 41 transfer-learning 39 breast-cancer 39 healthcare 37 covid-19 35 chest-xray-images 33 mri-images 33 medical-image-computing 32 unet-image-segmentation 30 keras-tensorflow 30 u-net 30 python3 29 data-science 29 radiology 29 generative-adversarial-network 27 gan 26 human-computer-interaction 26 kaggle 26 neural-network 26 neural-networks 25 javascript 25 registration 24 neuroimaging 24 3d 24 image-registration 23 datasets 23 medical-application 23 computed-tomography 23 visualization 22 itk 22 vtk 22 medical-images 21 nifti 21 deeplearning 21 self-supervised-learning 20 pneumonia-detection 19 object-detection 19 dicom-images 19 radiomics 18 detection 18 cancer-imaging-research 18 docker 17 super-resolution 17 medical-physics 17 semi-supervised-learning 17 explainable-ai 16 user-centered-design 16 image-reconstruction 16 dicom-viewer 16 image-analysis 16 tensorflow2 16 pacs 15 hacktoberfest 14 jupyter-notebook 14 brain-tumor-segmentation 14 open-source 14 brain 14 ct 14 cnn-classification 13 chest-xrays 13 cpp 13 c-plus-plus 13 transformers 13 mri-segmentation 13 pytorch-lightning 13 medical-informatics 12 ultrasound 12 magnetic-resonance-imaging 12 opencv 12 convolutional-neural-network 12 volume-rendering 12 bioinformatics 12 pathology 12