cbrnr/sleepecg

Sleep stage detection using ECG

Language: Python - Size: 3.08 MB - Last synced at: about 7 hours ago - Pushed at: 22 days ago - Stars: 124 - Forks: 27

mauricioAyllon/NASA-gamma

Gamma-ray spectroscopy analysis tools with a Graphical User Interface (GUI)

Language: Python - Size: 7.87 MB - Last synced at: 3 days ago - Pushed at: 3 days ago - Stars: 28 - Forks: 6

dd-hebert/uv_pro

Command line tool for parsing and processing UV-Vis data from the Agilent 845x Chemstation software.

Language: Python - Size: 5.09 MB - Last synced at: 3 days ago - Pushed at: 4 days ago - Stars: 2 - Forks: 1

sneumann/xcms

This is the git repository matching the Bioconductor package xcms: LC/MS and GC/MS Data Analysis

Language: R - Size: 141 MB - Last synced at: about 8 hours ago - Pushed at: about 9 hours ago - Stars: 198 - Forks: 81

rockyco/llm-fpga-design

LLM-Aided FPGA Design and Debug Flow

Language: C++ - Size: 249 KB - Last synced at: 10 days ago - Pushed at: 10 days ago - Stars: 9 - Forks: 4

s-fifteen-instruments/fpfind

Add-on implementation of frequency compensation for qcrypto.

Language: Python - Size: 266 KB - Last synced at: 15 days ago - Pushed at: 15 days ago - Stars: 0 - Forks: 0

raphaelvallat/yasa

YASA (Yet Another Spindle Algorithm): a Python package to analyze polysomnographic sleep recordings.

Language: Python - Size: 169 MB - Last synced at: 13 days ago - Pushed at: about 1 month ago - Stars: 454 - Forks: 117

avhn/peakdetect 📦

Simple peak detection

Language: Python - Size: 31.3 KB - Last synced at: 17 days ago - Pushed at: over 2 years ago - Stars: 56 - Forks: 13

leandcesar/PeakDetection

Real time peak detection with z-score for Arduino

Language: C++ - Size: 3.85 MB - Last synced at: 10 days ago - Pushed at: about 2 years ago - Stars: 68 - Forks: 18

JanCBrammer/biopeaks

A graphical user interface for feature extraction from heart- and breathing biosignals.

Language: Python - Size: 23.8 MB - Last synced at: about 8 hours ago - Pushed at: 8 months ago - Stars: 68 - Forks: 6

erdogant/caerus

Detection of favorable moments in time series data

Language: Python - Size: 4.78 MB - Last synced at: 9 days ago - Pushed at: 11 months ago - Stars: 31 - Forks: 2

falseywinchnet/PyITD

Intrinsic Time-Scale Decomposition

Language: Jupyter Notebook - Size: 197 MB - Last synced at: 28 days ago - Pushed at: 28 days ago - Stars: 12 - Forks: 3

mkgeiger/gamma-spectroscopy

Gamma Ray spectroscopy with an ESP32 microcontroller connected to a silcicon photomultiplier (SiPM)

Language: C++ - Size: 7.38 MB - Last synced at: 19 days ago - Pushed at: almost 2 years ago - Stars: 11 - Forks: 0

passive-radio/interactive-curve-fit

A Python project enables you to fit peaks interactively on GUI. You can visualize your spectrum and fit the optional number of the peaks on GUI using Scipy.optimize.curve_fit method.

Language: Python - Size: 9.86 MB - Last synced at: 4 days ago - Pushed at: over 2 years ago - Stars: 1 - Forks: 0

erdogant/findpeaks

The detection of peaks and valleys in a 1d-vector or 2d-array (image)

Language: Python - Size: 53.6 MB - Last synced at: 8 days ago - Pushed at: about 2 months ago - Stars: 249 - Forks: 34

TzurSoffer/clapDetection

clap detection that can detect a clap pattern, including single clap, double clap, and triple clap.

Language: Python - Size: 14.3 MB - Last synced at: 17 days ago - Pushed at: 4 months ago - Stars: 8 - Forks: 1

caravagnalab/CNAqc

CNAqc - Copy Number Alteration (CNA) Quality Check package

Language: R - Size: 690 MB - Last synced at: about 2 months ago - Pushed at: about 2 months ago - Stars: 19 - Forks: 8

DataboyUsen/Pulse-lead-Peak-Detection

This project uses Recurrence Plot(RP) to detect peaks caused by pulse from ppg signals. The main idea is labeling peaks for clean ppg signal first, then adding noise into ppg signal as trainning material. The model seleted for this task is a basic CNN model. See attached slides for more detais.

Language: Python - Size: 3.51 MB - Last synced at: 2 months ago - Pushed at: 2 months ago - Stars: 0 - Forks: 0

AidasBat/Biodata-analysis

Biodata analysis exercises which were completed during Vilnius university course 2022 #python

Language: Python - Size: 101 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 0 - Forks: 0

bihealth/NeatMS 📦

NeatMS is an open source python package for untargeted LCMS signal labelling and filtering.

Language: Python - Size: 44.7 MB - Last synced at: 6 days ago - Pushed at: over 3 years ago - Stars: 32 - Forks: 6

tobiasrausch/ATACseq

Analysis Workflow for Assay for Transposase-Accessible Chromatin using sequencing (ATAC-Seq)

Language: Shell - Size: 330 KB - Last synced at: 9 days ago - Pushed at: over 1 year ago - Stars: 75 - Forks: 36

MohsenAnvariBio/STM32_HealthMonitor

STM32F446RE | MAX301102 sensor | ILI9341 LCD| Signal Processing | Driver Development

Language: C - Size: 4.73 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 0 - Forks: 0

Tugbars/RLS-Driven-Peak-Analyzer

Microcontroller-friendly C implementation of Recursive Least Squares (RLS) for running gradient analysis, including linear, cubic, and quadratic trends, optimized for real-time trend and peak detection

Language: C - Size: 379 KB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 4 - Forks: 0

idslme/IDSL.IPA

Intrinsic Peak Analysis (IPA) pipeline for peak-picking in large-scale untargeted small molecule analysis including metabolomics, lipidomics, exposomics, and environmental studies.

Language: R - Size: 17.1 MB - Last synced at: 1 day ago - Pushed at: almost 2 years ago - Stars: 13 - Forks: 1

S-B-Iqbal/Spindle-Detection

Implementation of 'Continuous Wavelet Transformation' with a morlet basis for spindle detection.

Language: Jupyter Notebook - Size: 2.79 MB - Last synced at: 5 months ago - Pushed at: 5 months ago - Stars: 2 - Forks: 0

vganjali/PCWA

A highly parallel and fast event detector based on CWT transform.

Language: Python - Size: 11.4 MB - Last synced at: about 1 month ago - Pushed at: about 2 years ago - Stars: 8 - Forks: 0

BorgwardtLab/Topf

Topological peak filtering

Language: Python - Size: 89.8 KB - Last synced at: 8 days ago - Pushed at: over 4 years ago - Stars: 6 - Forks: 2

originlab/Python-Samples

Code examples for using the originpro Python package to interact with Origin software.

Language: Python - Size: 85 KB - Last synced at: 5 months ago - Pushed at: 5 months ago - Stars: 54 - Forks: 7

psambit9791/jdsp

A Java Library for Digital Signal Processing

Language: Java - Size: 31.5 MB - Last synced at: 6 months ago - Pushed at: 6 months ago - Stars: 249 - Forks: 43

RECETOX/recetox-aplcms Fork of tianwei-yu/apLCMS

This is a custom fork of apLCMS containing adaptations for large scale studies.

Language: R - Size: 24.5 MB - Last synced at: 7 months ago - Pushed at: 7 months ago - Stars: 4 - Forks: 8

rafael-a-monteiro-math/Rising_Sun_Envelope_Method

Companion website with an overview of the methods developed in the paper "The Rising Sun Envelope Method: an automatic and accurate peak location technique for XANES measurements".

Language: Jupyter Notebook - Size: 26.7 MB - Last synced at: about 1 month ago - Pushed at: over 3 years ago - Stars: 2 - Forks: 1

cbrnr/HeartBeats.jl

Language: Julia - Size: 154 KB - Last synced at: 18 days ago - Pushed at: 8 months ago - Stars: 11 - Forks: 3

wfinsinger/tapas

Trend And PeAkS (TAPAS) analysis of temporal series (e.g. paleoecological records) to assess long-term trend and detect events (and eventually estimate event-return intervals)

Language: R - Size: 3.17 MB - Last synced at: 8 months ago - Pushed at: 8 months ago - Stars: 11 - Forks: 2

Deceptrax123/Tamil-STT-using-Spectrogram-Analysis

Prototype solution of transcription of Tamil speech to phonetic sounds in the Tamil language.

Language: Python - Size: 18.6 KB - Last synced at: 9 months ago - Pushed at: 9 months ago - Stars: 0 - Forks: 0

VictorGiuPer/Peak-Detection-and-Separation-in-Mass-Spectrometry-Data

This project focuses on improving the analysis and separation of overlapping spectral peaks in mass spectrometry data. Accurate detection and separation of these peaks are crucial for identifying substances in complex mixtures, which has applications in various fields such as biochemistry, pharmacology, and environmental science.

Language: Jupyter Notebook - Size: 6.25 MB - Last synced at: 10 months ago - Pushed at: 10 months ago - Stars: 0 - Forks: 0

sajadamouei/Peak-detection-chip-seq

Implementation of a Peak detection pipeline in Python using machine learning models and sliding window on the H3K9me3_TDH_BP ChIP-seq dataset.

Language: Jupyter Notebook - Size: 867 KB - Last synced at: 10 months ago - Pushed at: 10 months ago - Stars: 0 - Forks: 0

Alvaisari/guess-fit

Language: Python - Size: 21.5 KB - Last synced at: 10 months ago - Pushed at: 10 months ago - Stars: 0 - Forks: 0

mkizilov/Raman-Spectra-Analyzer

Language: Jupyter Notebook - Size: 4.83 MB - Last synced at: 10 months ago - Pushed at: 10 months ago - Stars: 0 - Forks: 0

JC3/ZScorePeakDetection

A Qt port of the peak detection algorithm demo from https://stackoverflow.com/a/22640362, with interactive parameters.

Language: C++ - Size: 40 KB - Last synced at: 9 months ago - Pushed at: over 2 years ago - Stars: 6 - Forks: 1

adamkurth/cxls_hitfinder

Development for peak detection at CXLS/CXFEL. Mainly focusing on deep learning CNN networks.

Language: Jupyter Notebook - Size: 303 MB - Last synced at: 11 months ago - Pushed at: 11 months ago - Stars: 1 - Forks: 0

sorenwacker/ms-peakonly

Peak detection for untargeted metabolomics using Neural Network. High-level API based on peakonly by @Arseha.

Language: Jupyter Notebook - Size: 31.7 MB - Last synced at: 12 months ago - Pushed at: 12 months ago - Stars: 13 - Forks: 6

mlexchange/mlex_peak_detection

ML tool to detect peaks in 1D XRD scattering data

Language: Python - Size: 38.8 MB - Last synced at: 12 months ago - Pushed at: 12 months ago - Stars: 0 - Forks: 0

eivindtostesen/hierarchical_peak_finding

Data analysis of peak and valley regions

Language: Jupyter Notebook - Size: 3.06 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 2 - Forks: 1

LiuLabUB/HMMRATAC

HMMRATAC peak caller for ATAC-seq data

Language: Java - Size: 65.6 MB - Last synced at: about 1 year ago - Pushed at: almost 3 years ago - Stars: 96 - Forks: 22

HughIdiyit/rule_based_mosquito_detection

Contains the code for the two rule based mosquito detection algorithms of the paper "Counting Mosquitoes in the Wild: An Internet of Things Approach"

Language: Python - Size: 16.6 KB - Last synced at: about 1 year ago - Pushed at: over 3 years ago - Stars: 1 - Forks: 1

jchristopherson/peaks

PEAKS is a peak detection library meant to locate peaks and valleys in a signal.

Language: Fortran - Size: 224 KB - Last synced at: about 2 months ago - Pushed at: about 1 year ago - Stars: 3 - Forks: 0

jon-chun/sentimentarcs_notebooks

SentimentArcs: a large ensemble of dozens of sentiment analysis models to analyze emotion in text over time

Language: Jupyter Notebook - Size: 197 MB - Last synced at: about 1 year ago - Pushed at: about 2 years ago - Stars: 28 - Forks: 7

CardioKit/PeakWatch

Sample application to demonstrate the functionality of PeakSwift

Language: Jupyter Notebook - Size: 3.07 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 3 - Forks: 0

PTRRupprecht/Cell_Detection

Python code for merging and refinement of detected neurons in large 3D stacks

Language: Python - Size: 228 MB - Last synced at: about 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0

louisc-s/Extracellular-Action-Potential-Classification

Machine learning code implemented for classification of action potentials in electrode readings from cortical neurons.

Language: Python - Size: 20.6 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0

ferozemohideen/peak-detection-system

MATLAB project to detect and highlight peaks in electrophysiology (ephys) data, including research conducted as an intern for AxoSim Technologies

Language: Matlab - Size: 571 MB - Last synced at: over 1 year ago - Pushed at: over 6 years ago - Stars: 0 - Forks: 0

deltarod/PeakError Fork of tdhock/PeakError

A Python Binding for PeakError

Language: C - Size: 112 KB - Last synced at: over 1 year ago - Pushed at: about 4 years ago - Stars: 0 - Forks: 0

weygoldt/gp-chirpdetector 📦

Project from a lab rotation were we tried to create an algorithm that can detect and correctly assign transient communication signals on electrode grid recordings.

Language: Python - Size: 55.3 MB - Last synced at: over 1 year ago - Pushed at: almost 2 years ago - Stars: 0 - Forks: 1

ArthurBeaulieu/BeatDetect.js

Beat detector for audio files. KISS, light and library free.

Language: JavaScript - Size: 19.4 MB - Last synced at: over 1 year ago - Pushed at: almost 3 years ago - Stars: 14 - Forks: 1

HiWay-Media/peak-tracer Fork of p4xx07/peak-tracer

Peak Tracer is a command-line tool that helps you find the loudest parts of an audio file and export them as JSON or concatenate them into a new file.

Language: Go - Size: 43.9 KB - Last synced at: over 1 year ago - Pushed at: about 2 years ago - Stars: 0 - Forks: 0

yanvgf/peak-detection

Implementation and application of peak detection methods in time series

Language: Jupyter Notebook - Size: 4.67 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0

bhklab/CREAM

CREAM (Clustering of Functional Regions Analysis Method) is a new method for identification of clusters of functional regions (COREs) within chromosomes.

Language: R - Size: 2.47 MB - Last synced at: 9 days ago - Pushed at: about 4 years ago - Stars: 12 - Forks: 3

krispir/cpc

The purpose of the cpc package is primarily to characterize the peaks detected using a separate peak detection method. Currently the only supported preprocessing software is XCMS.

Language: C++ - Size: 9.25 MB - Last synced at: over 1 year ago - Pushed at: almost 3 years ago - Stars: 3 - Forks: 3

ryuzakyl/peaks-recognition

Noisy signal automatic peak detection and description

Language: Makefile - Size: 148 KB - Last synced at: over 1 year ago - Pushed at: about 7 years ago - Stars: 1 - Forks: 0

ryuzakyl/peaks-analysis

An algorithm to detect peaks/valleys in noisy signals

Language: C++ - Size: 6.84 KB - Last synced at: over 1 year ago - Pushed at: about 7 years ago - Stars: 4 - Forks: 1

SvrAdityaReddy/RTOS

Coursework of Real Time Operating Systems Course

Language: C - Size: 336 KB - Last synced at: over 1 year ago - Pushed at: about 7 years ago - Stars: 4 - Forks: 2

ayushrajdahal/BreathingRateAlgorithms

Proof of concepts of algorithms to be used for calculating breathing rate from accelerometer/gyroscope data.

Language: Jupyter Notebook - Size: 85.9 KB - Last synced at: over 1 year ago - Pushed at: over 2 years ago - Stars: 0 - Forks: 0

benhollar/py-local-maxima 📦

Find local maxima of a 2D image using Python and parallel processing techniques.

Language: Python - Size: 14.6 KB - Last synced at: over 1 year ago - Pushed at: over 4 years ago - Stars: 0 - Forks: 1

richardfm77/Figure_Classifier Fork of SrSujeto55/Figure_Classifier

Geometric Figure Class Classifier

Language: C# - Size: 52.7 KB - Last synced at: almost 2 years ago - Pushed at: almost 2 years ago - Stars: 0 - Forks: 0

BMSTU-team/vector_ECG

Командный проект по Векторной электрокардиографии

Language: Jupyter Notebook - Size: 12.5 MB - Last synced at: almost 2 years ago - Pushed at: almost 2 years ago - Stars: 4 - Forks: 0

000iZ/Time-Domain-Audio-Processing-in-Matlab

Matlab scripts for analyzing audio recordings in the time domain, with lowpass filters, identifications of peaks, and removal of silent regions

Language: MATLAB - Size: 2.54 MB - Last synced at: almost 2 years ago - Pushed at: almost 2 years ago - Stars: 0 - Forks: 0

kopalgarg/TiVaCPD

TiVaCPD Package: Time-Varying Correlation Networks for Interpretable Change Point Detection (TiVaCPD)

Language: Python - Size: 20.9 MB - Last synced at: about 1 month ago - Pushed at: over 2 years ago - Stars: 1 - Forks: 2

OmarKhalil10/Audio-Compressor-Using-Peak-and-RMS-Detection-Written-in-MATLAB

Audio Compressor Using Peak and RMS Detection Written in MATLAB

Language: MATLAB - Size: 7.31 MB - Last synced at: almost 2 years ago - Pushed at: almost 2 years ago - Stars: 0 - Forks: 0

rmauron/peak_height

As part of a fellow student's master's work, the height of peak series had to be measured. I ensured to facilitate the task with this script that automatically indicates these distances without the need to manually manipulate the data beforehand.

Language: Python - Size: 5.73 MB - Last synced at: almost 2 years ago - Pushed at: almost 2 years ago - Stars: 1 - Forks: 0

tkimhofer/msbrowser

An RShiny dashboard for visualisation of mass spectrometry (MS) data and fine-tuning of xcms pre-processing parameters

Language: R - Size: 88.4 MB - Last synced at: over 1 year ago - Pushed at: over 4 years ago - Stars: 4 - Forks: 2

eyal-lezmy/peak-detector

Detect peaks on an input signal

Language: C++ - Size: 10.7 KB - Last synced at: about 2 years ago - Pushed at: over 7 years ago - Stars: 9 - Forks: 1

antimattercorrade/Pan_Tompkins_QRS_Detection

Pan Tompkins QRS Wave Detection Algorithm Python Implementation

Language: Jupyter Notebook - Size: 7.61 MB - Last synced at: about 2 years ago - Pushed at: over 3 years ago - Stars: 13 - Forks: 5

CwbhX/Jamais-Vu

Audio Fingerprinting and Recognition in Python using NVidia's CUDA

Language: Python - Size: 27.3 MB - Last synced at: about 2 years ago - Pushed at: over 5 years ago - Stars: 25 - Forks: 6

adityatripathiiit/Pan_Tompkins_QRS_Detection

Python Implementation of Pan Tompkins Algorithm for QRS peak detection

Language: Jupyter Notebook - Size: 18.4 MB - Last synced at: about 2 years ago - Pushed at: over 3 years ago - Stars: 6 - Forks: 2

AditiBagora/StaticGestureRecognition 📦

The project takes an image that contains one hand static gesture and by using Image Processing(Python opencv) and an alogirthm calculates code bit i.e. state of each finger if it is open(1) closed(0) or half open(0.5) and maps it a corresponding word that is defined in a small static dictionary in the program. it uses the text to speech module to convert the word into speech. Sample images are placed in Images folder.

Size: 1.63 MB - Last synced at: 9 months ago - Pushed at: almost 4 years ago - Stars: 0 - Forks: 0

AditiBagora/DynamicGestureRecognition 📦

The project take video that contains one hand moving gesture and by using Image Processing(Python opencv) and an alogirthm calculates code bit i.e. state of each finger if it is open(1) closed(0) or half open(0.5) calculates the direction of movement of the object of interest i.e. hand and maps it a corresponding word that is defined in a small static dictionary in the program. Sample video is placed in Sentences folder.

Size: 4.35 MB - Last synced at: about 2 years ago - Pushed at: almost 4 years ago - Stars: 1 - Forks: 0

ShotaOchi/scorepeak

an R package for peak detection in univariate time series data

Language: C++ - Size: 48.8 KB - Last synced at: 18 days ago - Pushed at: about 4 years ago - Stars: 1 - Forks: 1

julian-rosas/geometric-figure-clasifier

Geometric Figure Clasifier program

Language: C# - Size: 61.5 KB - Last synced at: almost 2 years ago - Pushed at: over 2 years ago - Stars: 1 - Forks: 0

passive-radio/find-peaks

Python library for identifying the peaks using CNN and wavelet transform.

Language: Jupyter Notebook - Size: 11.5 MB - Last synced at: about 2 years ago - Pushed at: almost 3 years ago - Stars: 1 - Forks: 0

i-am-mandar/peak_detection

Goal is to detect peak in given signal(s) in directory \dataset with computation intelligence and not just signal processing. Here, we have used 1D CNN from Keras to achieve it.

Language: Python - Size: 79.5 MB - Last synced at: almost 2 years ago - Pushed at: over 2 years ago - Stars: 0 - Forks: 0

cmoineau/Hearthbeat_detection

R-peaks detection on ECG using the So&Chan method.

Language: Python - Size: 29.3 KB - Last synced at: about 2 years ago - Pushed at: almost 5 years ago - Stars: 1 - Forks: 0

milescb/LUComptonScatter

Package for data analysis specific to Lawrence University Compton scattering experiment

Language: Julia - Size: 810 KB - Last synced at: about 1 month ago - Pushed at: about 3 years ago - Stars: 0 - Forks: 0

RealPolitiX/peakfind2D

A peak-finding routine in Matlab for (electron) diffraction images

Language: Matlab - Size: 1.41 MB - Last synced at: about 2 years ago - Pushed at: over 6 years ago - Stars: 4 - Forks: 0

ysfzkn/PeakFinder2D

Peak finder greedy and divide and conquer algorithms for 2D array, written in java.

Language: Java - Size: 4.88 KB - Last synced at: about 2 years ago - Pushed at: about 4 years ago - Stars: 1 - Forks: 0

zaiyou12/z-scroe-peak-detection

Python transcription of the algorithm pseudocode given in stackoverflow z-scores algorithm

Language: Jupyter Notebook - Size: 181 KB - Last synced at: about 2 years ago - Pushed at: over 4 years ago - Stars: 1 - Forks: 1

petrokvitka/Footprints_extraction

A small script to find peaks from the .bigWig file and output them in a .bed file.

Language: Python - Size: 11 MB - Last synced at: almost 2 years ago - Pushed at: about 6 years ago - Stars: 0 - Forks: 0

shun60s/chainer-peak-detect

ディープラーニングフレームワークのchainerによるピーク位置の推定

Language: Python - Size: 297 KB - Last synced at: almost 2 years ago - Pushed at: almost 7 years ago - Stars: 0 - Forks: 0