An open API service providing repository metadata for many open source software ecosystems.

GitHub topics: pubtator

greenelab/pubtator

Retrieve and process PubTator annotations

Language: Python - Size: 55.7 MB - Last synced at: 2 days ago - Pushed at: over 1 year ago - Stars: 44 - Forks: 9

jakelever/biotext

Get a nicely-chunked local copy of the biomedical literature (to use for other projects)!

Language: Python - Size: 382 KB - Last synced at: 11 months ago - Pushed at: 11 months ago - Stars: 13 - Forks: 5

dandycodingpipe/pubAssociationFinder

Bioinformatics, Omics, NLP : Masters 1st year internship project

Language: R - Size: 7.1 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0

mtpandi/Text-Mining-for-PGx

A Text Mining project applied to PGx-related available literature from PubMed

Language: R - Size: 13.6 MB - Last synced at: about 2 years ago - Pushed at: over 4 years ago - Stars: 3 - Forks: 1

ArshSekhon/pubtator_loader

A Python ๐Ÿ package to load PubTator Documents ๐Ÿงพ, tokenize and convert them to BILUO Format.

Language: Python - Size: 38.1 KB - Last synced at: 28 days ago - Pushed at: about 2 years ago - Stars: 6 - Forks: 3

izuna385/PubTator-Multiprocess-Parser

Specifically for Entity Linking. Quick demo with MedMentions and NCBI datasets is also included.

Language: Python - Size: 1.31 MB - Last synced at: about 1 month ago - Pushed at: about 4 years ago - Stars: 1 - Forks: 1