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GitHub topics: qm-mm

Eipgen/Neural-Network-Models-for-Chemistry

A collection of Nerual Network Models for chemistry

Size: 698 KB - Last synced at: 2 days ago - Pushed at: 2 days ago - Stars: 132 - Forks: 20

RagnarB83/ash

ASH is a Python-based computational chemistry and QM/MM environment, primarily for molecular calculations in the gas phase, explicit solution, crystal or protein environment.

Language: Python - Size: 218 MB - Last synced at: 9 days ago - Pushed at: 9 days ago - Stars: 72 - Forks: 17

Sergi-Ortiz/CompChem-TFG

Scripts used in the Chemistry final BSc project (Treball de Fi de Grau)

Language: C - Size: 220 MB - Last synced at: 27 days ago - Pushed at: 27 days ago - Stars: 0 - Forks: 0

Oishika-1/QM-MM_MjGATase_Succinimide

Size: 14.5 MB - Last synced at: about 2 months ago - Pushed at: about 2 months ago - Stars: 0 - Forks: 0

hopanoid/Enzyme-Reaction-Dynamics-Tutorial

A QM-MM Tutorial of Enzyme Reaction Dynamics

Language: Shell - Size: 9.95 MB - Last synced at: about 2 months ago - Pushed at: 2 months ago - Stars: 1 - Forks: 1

jjg52/interpolated_pmfs

Interpolated PMFs link minima on the Free Energy Hypersurface via interpolation between structures. Iterative examples can be calculated between minima and maxima to smooth the scan. Code written to complement existing fDynamo library.

Language: Roff - Size: 6.48 MB - Last synced at: over 1 year ago - Pushed at: about 4 years ago - Stars: 1 - Forks: 0

ryanmrichard/ForceManII

MM code for QM people

Language: C++ - Size: 15 MB - Last synced at: almost 2 years ago - Pushed at: over 7 years ago - Stars: 1 - Forks: 1

melomcr/QMMM_String_eABF_Tutorial

NAMD QM/MM Tutorial on Free Energy Profile of Reaction Mechanisms

Language: Jupyter Notebook - Size: 484 MB - Last synced at: about 2 years ago - Pushed at: over 6 years ago - Stars: 8 - Forks: 1

MolBioMedUAB/RCBS.py

RCBS.py (Reactivity of Chemical and Biochemical Systems) is a Python package that contains several scripts, functions and classes that simplify the analysis of chemical and biochemical simulations.

Language: Python - Size: 9.33 MB - Last synced at: 14 days ago - Pushed at: about 1 year ago - Stars: 3 - Forks: 0