Ecosyste.ms: Repos
An open API service providing repository metadata for many open source software ecosystems.
GitHub topics: sambamba
Clinical-Genomics/chanjo
Chanjo provides a better way to analyze coverage data in clinical sequencing.
Language: Python - Size: 14.7 MB - Last synced: 2 days ago - Pushed: 3 days ago - Stars: 48 - Forks: 12
tdayris/fair_bowtie2_mapping
Align reads over a reference genome, filter aligned-reads, and mark duplicates
Language: Python - Size: 7.38 MB - Last synced: about 1 month ago - Pushed: about 1 month ago - Stars: 0 - Forks: 0
Sydney-Informatics-Hub/bamQC-nf
Report summary statistics relating to quality of bam files with Nextflow
Language: Nextflow - Size: 1.03 MB - Last synced: about 1 month ago - Pushed: over 1 year ago - Stars: 0 - Forks: 0
tdayris/fair_macs2_calling
Snakemake workflow used to call peaks with Macs2
Language: Python - Size: 3.5 MB - Last synced: about 1 month ago - Pushed: about 1 month ago - Stars: 0 - Forks: 0
UCSC-Treehouse/mend_qc
Count Mapped Exonic Non-Duplicate (MEND) reads in an RNA Seq bam file
Language: R - Size: 4.21 MB - Last synced: 7 months ago - Pushed: over 1 year ago - Stars: 4 - Forks: 0
guigolab/sambamBench-nf
A simple Nextflow pipeline for testing the performance of sambamba vs samtools
Language: Nextflow - Size: 813 KB - Last synced: about 1 year ago - Pushed: about 6 years ago - Stars: 3 - Forks: 3
