Ecosyste.ms: Repos
An open API service providing repository metadata for many open source software ecosystems.
GitHub topics: varfish
varfish-org/mehari
VEP-like tool for sequence ontology and HGVS annotation of VCF files
Language: Rust - Size: 3.56 MB - Last synced: about 10 hours ago - Pushed: about 11 hours ago - Stars: 12 - Forks: 1
varfish-org/hgvs-rs
A port of biocommons/hgvs to the Rust programming language
Language: Rust - Size: 1.07 MB - Last synced: 1 day ago - Pushed: 2 days ago - Stars: 8 - Forks: 2
varfish-org/annonars
Genome annotation based on Rust and RocksDB
Language: Rust - Size: 18.9 MB - Last synced: 1 day ago - Pushed: 2 days ago - Stars: 5 - Forks: 0
varfish-org/annonars-data-clinvar
Clinvar data builds for annonars
Language: HCL - Size: 62.5 KB - Last synced: 3 days ago - Pushed: 3 days ago - Stars: 1 - Forks: 0
varfish-org/varfish-docker-compose-ng
(Next-generation; in-development) VarFish Docker Compose
Language: Shell - Size: 93.8 KB - Last synced: 11 days ago - Pushed: 11 days ago - Stars: 0 - Forks: 0
varfish-org/varfish-server
VarFish: comprehensive DNA variant analysis for diagnostics and research
Language: Python - Size: 54.7 MB - Last synced: 17 days ago - Pushed: 18 days ago - Stars: 40 - Forks: 11
varfish-org/varfish-cli
VarFish REST API client (CLI + Python package)
Language: Python - Size: 356 KB - Last synced: about 1 month ago - Pushed: about 1 month ago - Stars: 2 - Forks: 3
varfish-org/varfish-dev-docs
VarFish software development documentation
Language: Makefile - Size: 34.2 KB - Last synced: 2 months ago - Pushed: 2 months ago - Stars: 0 - Forks: 0
varfish-org/cada-prio
Re-implementation of the CADA phenotype-based prioritization algorithm
Language: Python - Size: 74.2 KB - Last synced: 5 days ago - Pushed: 5 days ago - Stars: 0 - Forks: 0
varfish-org/varfish-docker-compose
Setup VarFish as using Docker Compose
Language: Makefile - Size: 50.8 KB - Last synced: 4 months ago - Pushed: 4 months ago - Stars: 5 - Forks: 5
varfish-org/varfish-data-igsr
Repository for building IGSR data sets for use in VarFish
Language: Python - Size: 60.5 KB - Last synced: 4 months ago - Pushed: 4 months ago - Stars: 0 - Forks: 0
varfish-org/viguno
Versatile Interface for Genetics Utilization of Nice Ontologies
Language: Rust - Size: 441 KB - Last synced: 17 days ago - Pushed: 18 days ago - Stars: 0 - Forks: 0
varfish-org/varfish-db-downloader
Download public databases for VarFish
Language: Python - Size: 2.17 MB - Last synced: 17 days ago - Pushed: 2 months ago - Stars: 3 - Forks: 3
varfish-org/seqrepo-rs
A port of biocommons/seqrepo to the Rust programming language
Language: Rust - Size: 127 KB - Last synced: 5 days ago - Pushed: 5 days ago - Stars: 3 - Forks: 1
varfish-org/scarus
Automated evaluation of ACMG rules
Language: Rust - Size: 6.16 MB - Last synced: 2 months ago - Pushed: 2 months ago - Stars: 0 - Forks: 0
varfish-org/rocksdb-utils-lookup
Utilities for using RocksDB as read-only lookup table (after initial bulk import)
Language: Rust - Size: 149 KB - Last synced: about 21 hours ago - Pushed: 3 months ago - Stars: 0 - Forks: 0
varfish-org/biocommons-bioutils-rs
(Partial) port of biocommons/bioutils to Rust
Language: Rust - Size: 218 KB - Last synced: 17 days ago - Pushed: 4 months ago - Stars: 0 - Forks: 0
varfish-org/varfish-server-worker
Rust-based background worker for varfish-server
Language: Rust - Size: 2.34 MB - Last synced: 4 days ago - Pushed: 4 days ago - Stars: 2 - Forks: 1