Ecosyste.ms: Repos
An open API service providing repository metadata for many open source software ecosystems.
GitHub topics: vep-annotation
pstawinski/pygenebe
PyGeneBe: A Python client seamlessly integrating with the GeneBe platform, offering efficient annotation of genetic variants through its API, while supporting pandas, VCF file formats, and HGVS parsing
Language: Python - Size: 2.77 MB - Last synced: 15 days ago - Pushed: 3 months ago - Stars: 1 - Forks: 0
CERC-Genomic-Medicine/vep_pipeline
Pipeline for variant annotation using Variant Effect Predictor (VEP)
Language: Jupyter Notebook - Size: 554 KB - Last synced: 6 months ago - Pushed: over 1 year ago - Stars: 1 - Forks: 1
bch-gnome/hpds_annotation
Annotation pipeline for HPDS
Language: Python - Size: 56.6 KB - Last synced: 8 months ago - Pushed: about 1 year ago - Stars: 3 - Forks: 2
CansuDincer/BEstimate
BEstimate, a Python module that systematically analyses guide RNA (gRNA) targetable sites across given sequences for given Base Editors, and functional and clinical effects of the potential edits on the resulting proteins.
Language: Python - Size: 4.24 MB - Last synced: 6 months ago - Pushed: 6 months ago - Stars: 3 - Forks: 0
GuilhermeBPinheiro/savep_v01.2022
Pipeline para Anotação de Arquivo VCF de Variantes Somáticas utilizando o Ensembl Variant Effect Predictor (VEP) version 105.0 via Google Colab. O SAVEP_v01.2022 é de código aberto e está disponível no GitHub.
Size: 868 KB - Last synced: 10 months ago - Pushed: over 1 year ago - Stars: 2 - Forks: 0
